Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim39Q9ESN2 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trim39Q9ESN2 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim39Q9ESN2 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim39Q9ESN2 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Trim39Q9ESN2 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim39Q9ESN2 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim39Q9ESN2 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim39Q9ESN2 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim39Q9ESN2 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim39Q9ESN2 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC12.17□□□□□ -0.46
Trim39Q9ESN2 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim39Q9ESN2 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trim39Q9ESN2 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim39Q9ESN2 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim39Q9ESN2 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC12.16□□□□□ -0.46
Trim39Q9ESN2 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.16□□□□□ -0.46
Trim39Q9ESN2 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim39Q9ESN2 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trim39Q9ESN2 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trim39Q9ESN2 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC12.16□□□□□ -0.46
Trim39Q9ESN2 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Trim39Q9ESN2 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trim39Q9ESN2 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim39Q9ESN2 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim39Q9ESN2 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trim39Q9ESN2 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trim39Q9ESN2 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trim39Q9ESN2 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trim39Q9ESN2 Gm27437-201ENSMUST00000183429 107 ntBASIC12.16□□□□□ -0.46
Trim39Q9ESN2 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Trim39Q9ESN2 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Trim39Q9ESN2 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC12.16□□□□□ -0.46
Trim39Q9ESN2 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trim39Q9ESN2 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim39Q9ESN2 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim39Q9ESN2 Gemin6-201ENSMUST00000069486 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim39Q9ESN2 Gm2423-201ENSMUST00000074863 733 ntBASIC12.16□□□□□ -0.46
Trim39Q9ESN2 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim39Q9ESN2 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim39Q9ESN2 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim39Q9ESN2 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.16□□□□□ -0.46
Trim39Q9ESN2 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim39Q9ESN2 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trim39Q9ESN2 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trim39Q9ESN2 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trim39Q9ESN2 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC12.16□□□□□ -0.46
Trim39Q9ESN2 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim39Q9ESN2 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim39Q9ESN2 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trim39Q9ESN2 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trim39Q9ESN2 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trim39Q9ESN2 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim39Q9ESN2 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Trim39Q9ESN2 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim39Q9ESN2 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trim39Q9ESN2 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim39Q9ESN2 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Trim39Q9ESN2 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim39Q9ESN2 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim39Q9ESN2 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim39Q9ESN2 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim39Q9ESN2 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Trim39Q9ESN2 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trim39Q9ESN2 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim39Q9ESN2 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim39Q9ESN2 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC12.15□□□□□ -0.46
Trim39Q9ESN2 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.15□□□□□ -0.46
Trim39Q9ESN2 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim39Q9ESN2 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC12.15□□□□□ -0.46
Trim39Q9ESN2 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Trim39Q9ESN2 Gm21868-201ENSMUST00000185623 1230 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trim39Q9ESN2 Gm20803-202ENSMUST00000190968 1230 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trim39Q9ESN2 Gm5069-202ENSMUST00000192714 1011 ntBASIC12.15□□□□□ -0.46
Trim39Q9ESN2 Gm43094-201ENSMUST00000196549 921 ntBASIC12.15□□□□□ -0.46
Trim39Q9ESN2 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.15□□□□□ -0.46
Trim39Q9ESN2 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trim39Q9ESN2 AC132446.1-201ENSMUST00000222655 226 ntBASIC12.15□□□□□ -0.46
Trim39Q9ESN2 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim39Q9ESN2 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim39Q9ESN2 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trim39Q9ESN2 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim39Q9ESN2 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim39Q9ESN2 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trim39Q9ESN2 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim39Q9ESN2 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim39Q9ESN2 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trim39Q9ESN2 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim39Q9ESN2 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.15□□□□□ -0.47
Trim39Q9ESN2 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trim39Q9ESN2 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trim39Q9ESN2 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
Trim39Q9ESN2 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.14□□□□□ -0.47
Trim39Q9ESN2 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim39Q9ESN2 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Trim39Q9ESN2 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim39Q9ESN2 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trim39Q9ESN2 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.14□□□□□ -0.47
Trim39Q9ESN2 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.14□□□□□ -0.47
Trim39Q9ESN2 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms