Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Tubb3Q9ERD7 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.88□□□□□ -0.35
Tubb3Q9ERD7 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Tubb3Q9ERD7 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Tubb3Q9ERD7 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tubb3Q9ERD7 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tubb3Q9ERD7 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Tubb3Q9ERD7 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Tubb3Q9ERD7 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.88□□□□□ -0.35
Tubb3Q9ERD7 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.88□□□□□ -0.35
Tubb3Q9ERD7 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tubb3Q9ERD7 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.88□□□□□ -0.35
Tubb3Q9ERD7 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tubb3Q9ERD7 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tubb3Q9ERD7 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Tubb3Q9ERD7 Gm24447-201ENSMUST00000083977 338 ntBASIC12.88□□□□□ -0.35
Tubb3Q9ERD7 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tubb3Q9ERD7 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Tubb3Q9ERD7 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Tubb3Q9ERD7 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tubb3Q9ERD7 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tubb3Q9ERD7 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tubb3Q9ERD7 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tubb3Q9ERD7 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.88□□□□□ -0.35
Tubb3Q9ERD7 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.88□□□□□ -0.35
Tubb3Q9ERD7 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tubb3Q9ERD7 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Tubb3Q9ERD7 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.88□□□□□ -0.35
Tubb3Q9ERD7 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tubb3Q9ERD7 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tubb3Q9ERD7 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Tubb3Q9ERD7 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Tubb3Q9ERD7 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tubb3Q9ERD7 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tubb3Q9ERD7 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Tubb3Q9ERD7 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tubb3Q9ERD7 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.87□□□□□ -0.35
Tubb3Q9ERD7 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tubb3Q9ERD7 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
Tubb3Q9ERD7 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tubb3Q9ERD7 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tubb3Q9ERD7 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tubb3Q9ERD7 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tubb3Q9ERD7 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.87□□□□□ -0.35
Tubb3Q9ERD7 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tubb3Q9ERD7 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tubb3Q9ERD7 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tubb3Q9ERD7 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.87□□□□□ -0.35
Tubb3Q9ERD7 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Tubb3Q9ERD7 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.87□□□□□ -0.35
Tubb3Q9ERD7 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Tubb3Q9ERD7 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tubb3Q9ERD7 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.87□□□□□ -0.35
Tubb3Q9ERD7 Gm8652-201ENSMUST00000181363 964 ntBASIC12.87□□□□□ -0.35
Tubb3Q9ERD7 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.87□□□□□ -0.35
Tubb3Q9ERD7 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tubb3Q9ERD7 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tubb3Q9ERD7 Gm17330-201ENSMUST00000221047 165 ntBASIC12.87□□□□□ -0.35
Tubb3Q9ERD7 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tubb3Q9ERD7 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC12.87□□□□□ -0.35
Tubb3Q9ERD7 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Tubb3Q9ERD7 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Tubb3Q9ERD7 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tubb3Q9ERD7 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tubb3Q9ERD7 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tubb3Q9ERD7 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.87□□□□□ -0.35
Tubb3Q9ERD7 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tubb3Q9ERD7 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.87□□□□□ -0.35
Tubb3Q9ERD7 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Tubb3Q9ERD7 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Tubb3Q9ERD7 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tubb3Q9ERD7 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tubb3Q9ERD7 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.87□□□□□ -0.35
Tubb3Q9ERD7 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Tubb3Q9ERD7 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Tubb3Q9ERD7 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tubb3Q9ERD7 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tubb3Q9ERD7 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Tubb3Q9ERD7 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tubb3Q9ERD7 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tubb3Q9ERD7 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tubb3Q9ERD7 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.87□□□□□ -0.35
Tubb3Q9ERD7 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tubb3Q9ERD7 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.86□□□□□ -0.35
Tubb3Q9ERD7 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tubb3Q9ERD7 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tubb3Q9ERD7 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Tubb3Q9ERD7 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Tubb3Q9ERD7 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.86□□□□□ -0.35
Tubb3Q9ERD7 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tubb3Q9ERD7 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Tubb3Q9ERD7 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tubb3Q9ERD7 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tubb3Q9ERD7 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.86□□□□□ -0.35
Tubb3Q9ERD7 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tubb3Q9ERD7 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tubb3Q9ERD7 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.86□□□□□ -0.35
Tubb3Q9ERD7 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC12.86□□□□□ -0.35
Tubb3Q9ERD7 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.86□□□□□ -0.35
Tubb3Q9ERD7 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 70.2 ms