Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hmgn3Q9DCB1 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hmgn3Q9DCB1 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hmgn3Q9DCB1 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Hmgn3Q9DCB1 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.47
Hmgn3Q9DCB1 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Hmgn3Q9DCB1 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Hmgn3Q9DCB1 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Hmgn3Q9DCB1 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Hmgn3Q9DCB1 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Hmgn3Q9DCB1 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Hmgn3Q9DCB1 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hmgn3Q9DCB1 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hmgn3Q9DCB1 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hmgn3Q9DCB1 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hmgn3Q9DCB1 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC12.14□□□□□ -0.47
Hmgn3Q9DCB1 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hmgn3Q9DCB1 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hmgn3Q9DCB1 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Hmgn3Q9DCB1 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hmgn3Q9DCB1 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Hmgn3Q9DCB1 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hmgn3Q9DCB1 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hmgn3Q9DCB1 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hmgn3Q9DCB1 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hmgn3Q9DCB1 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hmgn3Q9DCB1 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hmgn3Q9DCB1 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hmgn3Q9DCB1 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hmgn3Q9DCB1 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hmgn3Q9DCB1 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hmgn3Q9DCB1 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Hmgn3Q9DCB1 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC12.14□□□□□ -0.47
Hmgn3Q9DCB1 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC12.14□□□□□ -0.47
Hmgn3Q9DCB1 Gm9824-201ENSMUST00000178707 561 ntBASIC12.14□□□□□ -0.47
Hmgn3Q9DCB1 Mir6990-201ENSMUST00000183724 91 ntBASIC12.14□□□□□ -0.47
Hmgn3Q9DCB1 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Hmgn3Q9DCB1 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Hmgn3Q9DCB1 Gm43125-201ENSMUST00000201724 730 ntBASIC12.14□□□□□ -0.47
Hmgn3Q9DCB1 Dupd1-202ENSMUST00000224735 548 ntBASIC12.14□□□□□ -0.47
Hmgn3Q9DCB1 AC225888.1-201ENSMUST00000227184 728 ntBASIC12.14□□□□□ -0.47
Hmgn3Q9DCB1 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hmgn3Q9DCB1 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hmgn3Q9DCB1 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hmgn3Q9DCB1 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hmgn3Q9DCB1 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hmgn3Q9DCB1 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hmgn3Q9DCB1 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Hmgn3Q9DCB1 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Hmgn3Q9DCB1 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Hmgn3Q9DCB1 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hmgn3Q9DCB1 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hmgn3Q9DCB1 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Hmgn3Q9DCB1 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hmgn3Q9DCB1 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.14□□□□□ -0.47
Hmgn3Q9DCB1 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hmgn3Q9DCB1 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hmgn3Q9DCB1 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hmgn3Q9DCB1 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hmgn3Q9DCB1 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hmgn3Q9DCB1 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hmgn3Q9DCB1 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Hmgn3Q9DCB1 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hmgn3Q9DCB1 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Hmgn3Q9DCB1 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Hmgn3Q9DCB1 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Hmgn3Q9DCB1 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hmgn3Q9DCB1 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hmgn3Q9DCB1 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hmgn3Q9DCB1 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Hmgn3Q9DCB1 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.13□□□□□ -0.47
Hmgn3Q9DCB1 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Hmgn3Q9DCB1 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hmgn3Q9DCB1 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.13□□□□□ -0.47
Hmgn3Q9DCB1 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hmgn3Q9DCB1 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hmgn3Q9DCB1 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hmgn3Q9DCB1 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hmgn3Q9DCB1 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hmgn3Q9DCB1 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hmgn3Q9DCB1 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Hmgn3Q9DCB1 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hmgn3Q9DCB1 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC12.13□□□□□ -0.47
Hmgn3Q9DCB1 Gm9719-201ENSMUST00000162765 543 ntBASIC12.13□□□□□ -0.47
Hmgn3Q9DCB1 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC12.13□□□□□ -0.47
Hmgn3Q9DCB1 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC12.13□□□□□ -0.47
Hmgn3Q9DCB1 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Hmgn3Q9DCB1 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Hmgn3Q9DCB1 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC12.13□□□□□ -0.47
Hmgn3Q9DCB1 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
Hmgn3Q9DCB1 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC12.13□□□□□ -0.47
Hmgn3Q9DCB1 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.13□□□□□ -0.47
Hmgn3Q9DCB1 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hmgn3Q9DCB1 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Hmgn3Q9DCB1 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Hmgn3Q9DCB1 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Hmgn3Q9DCB1 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Hmgn3Q9DCB1 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hmgn3Q9DCB1 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hmgn3Q9DCB1 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms