Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Snf8Q9CZ28 Gm6263-201ENSMUST00000120029 1342 ntBASIC13.34□□□□□ -0.27
Snf8Q9CZ28 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Snf8Q9CZ28 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Snf8Q9CZ28 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Snf8Q9CZ28 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Snf8Q9CZ28 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Snf8Q9CZ28 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC13.33□□□□□ -0.27
Snf8Q9CZ28 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Snf8Q9CZ28 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Snf8Q9CZ28 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC13.33□□□□□ -0.27
Snf8Q9CZ28 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Snf8Q9CZ28 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Snf8Q9CZ28 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Snf8Q9CZ28 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Snf8Q9CZ28 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Snf8Q9CZ28 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Snf8Q9CZ28 CT009757.3-201ENSMUST00000223367 2320 ntBASIC13.33□□□□□ -0.28
Snf8Q9CZ28 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Snf8Q9CZ28 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Snf8Q9CZ28 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC13.33□□□□□ -0.28
Snf8Q9CZ28 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC13.33□□□□□ -0.28
Snf8Q9CZ28 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Snf8Q9CZ28 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Snf8Q9CZ28 Mir8102-201ENSMUST00000184148 139 ntBASIC13.33□□□□□ -0.28
Snf8Q9CZ28 Mir7023-201ENSMUST00000185093 64 ntBASIC13.33□□□□□ -0.28
Snf8Q9CZ28 Gm29667-201ENSMUST00000190817 490 ntBASIC13.33□□□□□ -0.28
Snf8Q9CZ28 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC13.33□□□□□ -0.28
Snf8Q9CZ28 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Snf8Q9CZ28 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
Snf8Q9CZ28 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Snf8Q9CZ28 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Snf8Q9CZ28 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC13.33□□□□□ -0.28
Snf8Q9CZ28 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Snf8Q9CZ28 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Snf8Q9CZ28 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC13.33□□□□□ -0.28
Snf8Q9CZ28 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC13.33□□□□□ -0.28
Snf8Q9CZ28 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Snf8Q9CZ28 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Snf8Q9CZ28 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Snf8Q9CZ28 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Snf8Q9CZ28 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Snf8Q9CZ28 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Snf8Q9CZ28 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Snf8Q9CZ28 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Snf8Q9CZ28 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Snf8Q9CZ28 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Snf8Q9CZ28 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Snf8Q9CZ28 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Snf8Q9CZ28 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Snf8Q9CZ28 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Snf8Q9CZ28 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Snf8Q9CZ28 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Snf8Q9CZ28 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Snf8Q9CZ28 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Snf8Q9CZ28 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC13.32□□□□□ -0.28
Snf8Q9CZ28 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC13.32□□□□□ -0.28
Snf8Q9CZ28 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Snf8Q9CZ28 AC135669.1-202ENSMUST00000216742 540 ntBASIC13.32□□□□□ -0.28
Snf8Q9CZ28 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Snf8Q9CZ28 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Snf8Q9CZ28 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Snf8Q9CZ28 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC13.32□□□□□ -0.28
Snf8Q9CZ28 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Snf8Q9CZ28 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC13.32□□□□□ -0.28
Snf8Q9CZ28 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Snf8Q9CZ28 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Snf8Q9CZ28 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Snf8Q9CZ28 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Snf8Q9CZ28 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC13.32□□□□□ -0.28
Snf8Q9CZ28 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Snf8Q9CZ28 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC13.32□□□□□ -0.28
Snf8Q9CZ28 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Snf8Q9CZ28 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Snf8Q9CZ28 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Snf8Q9CZ28 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Snf8Q9CZ28 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Snf8Q9CZ28 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Snf8Q9CZ28 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Snf8Q9CZ28 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Snf8Q9CZ28 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Snf8Q9CZ28 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC13.31□□□□□ -0.28
Snf8Q9CZ28 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Snf8Q9CZ28 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Snf8Q9CZ28 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Snf8Q9CZ28 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Snf8Q9CZ28 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Snf8Q9CZ28 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Snf8Q9CZ28 Zfp125-201ENSMUST00000079237 2488 ntBASIC13.31□□□□□ -0.28
Snf8Q9CZ28 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Snf8Q9CZ28 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Snf8Q9CZ28 Pck2-205ENSMUST00000226352 2784 ntBASIC13.31□□□□□ -0.28
Snf8Q9CZ28 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Snf8Q9CZ28 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Snf8Q9CZ28 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Snf8Q9CZ28 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Snf8Q9CZ28 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC13.31□□□□□ -0.28
Snf8Q9CZ28 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Snf8Q9CZ28 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Snf8Q9CZ28 Gm12416-201ENSMUST00000120911 1008 ntBASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 88.5 ms