Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ssu72Q9CY97 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ssu72Q9CY97 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ssu72Q9CY97 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ssu72Q9CY97 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ssu72Q9CY97 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ssu72Q9CY97 Abhd6-203ENSMUST00000225234 1958 ntBASIC12.85□□□□□ -0.35
Ssu72Q9CY97 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.85□□□□□ -0.35
Ssu72Q9CY97 Fgf17-202ENSMUST00000227123 1336 ntBASIC12.85□□□□□ -0.35
Ssu72Q9CY97 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ssu72Q9CY97 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ssu72Q9CY97 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ssu72Q9CY97 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ssu72Q9CY97 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ssu72Q9CY97 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ssu72Q9CY97 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Ssu72Q9CY97 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ssu72Q9CY97 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ssu72Q9CY97 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ssu72Q9CY97 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Ssu72Q9CY97 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ssu72Q9CY97 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Ssu72Q9CY97 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Ssu72Q9CY97 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.84□□□□□ -0.35
Ssu72Q9CY97 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ssu72Q9CY97 Gm14822-201ENSMUST00000122247 291 ntBASIC12.84□□□□□ -0.35
Ssu72Q9CY97 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Ssu72Q9CY97 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC12.84□□□□□ -0.35
Ssu72Q9CY97 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Ssu72Q9CY97 Gm22175-201ENSMUST00000175007 78 ntBASIC12.84□□□□□ -0.35
Ssu72Q9CY97 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Ssu72Q9CY97 Gm9522-201ENSMUST00000182394 926 ntBASIC12.84□□□□□ -0.35
Ssu72Q9CY97 Gm17837-201ENSMUST00000186435 985 ntBASIC12.84□□□□□ -0.35
Ssu72Q9CY97 Gm10576-201ENSMUST00000191927 825 ntBASIC12.84□□□□□ -0.35
Ssu72Q9CY97 Gm38223-201ENSMUST00000194484 695 ntBASIC12.84□□□□□ -0.35
Ssu72Q9CY97 Gm35960-201ENSMUST00000202712 767 ntBASIC12.84□□□□□ -0.35
Ssu72Q9CY97 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC12.84□□□□□ -0.35
Ssu72Q9CY97 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ssu72Q9CY97 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ssu72Q9CY97 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ssu72Q9CY97 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC12.84□□□□□ -0.35
Ssu72Q9CY97 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC12.84□□□□□ -0.35
Ssu72Q9CY97 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Ssu72Q9CY97 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ssu72Q9CY97 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ssu72Q9CY97 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ssu72Q9CY97 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ssu72Q9CY97 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ssu72Q9CY97 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ssu72Q9CY97 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ssu72Q9CY97 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ssu72Q9CY97 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Ssu72Q9CY97 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ssu72Q9CY97 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ssu72Q9CY97 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ssu72Q9CY97 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Ssu72Q9CY97 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.84□□□□□ -0.35
Ssu72Q9CY97 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ssu72Q9CY97 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Ssu72Q9CY97 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ssu72Q9CY97 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ssu72Q9CY97 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Ssu72Q9CY97 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Ssu72Q9CY97 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Ssu72Q9CY97 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Ssu72Q9CY97 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.83□□□□□ -0.35
Ssu72Q9CY97 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.83□□□□□ -0.36
Ssu72Q9CY97 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Ssu72Q9CY97 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ssu72Q9CY97 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ssu72Q9CY97 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ssu72Q9CY97 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ssu72Q9CY97 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Ssu72Q9CY97 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ssu72Q9CY97 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ssu72Q9CY97 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ssu72Q9CY97 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ssu72Q9CY97 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ssu72Q9CY97 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ssu72Q9CY97 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Ssu72Q9CY97 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ssu72Q9CY97 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC12.83□□□□□ -0.36
Ssu72Q9CY97 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ssu72Q9CY97 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC12.83□□□□□ -0.36
Ssu72Q9CY97 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC12.83□□□□□ -0.36
Ssu72Q9CY97 Gm2756-201ENSMUST00000195851 400 ntBASIC12.83□□□□□ -0.36
Ssu72Q9CY97 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.83□□□□□ -0.36
Ssu72Q9CY97 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ssu72Q9CY97 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.83□□□□□ -0.36
Ssu72Q9CY97 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ssu72Q9CY97 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ssu72Q9CY97 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ssu72Q9CY97 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ssu72Q9CY97 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ssu72Q9CY97 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ssu72Q9CY97 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ssu72Q9CY97 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.83□□□□□ -0.36
Ssu72Q9CY97 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ssu72Q9CY97 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ssu72Q9CY97 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms