Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.44□□□□□ -0.42
Khdc3Q9CWU5 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.44□□□□□ -0.42
Khdc3Q9CWU5 Gm44069-201ENSMUST00000204898 506 ntBASIC12.44□□□□□ -0.42
Khdc3Q9CWU5 Gm45059-201ENSMUST00000205558 1077 ntBASIC12.44□□□□□ -0.42
Khdc3Q9CWU5 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Khdc3Q9CWU5 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Khdc3Q9CWU5 CT030657.3-201ENSMUST00000222707 1200 ntBASIC12.44□□□□□ -0.42
Khdc3Q9CWU5 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Khdc3Q9CWU5 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Khdc3Q9CWU5 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Khdc3Q9CWU5 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Khdc3Q9CWU5 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Khdc3Q9CWU5 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Khdc3Q9CWU5 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Khdc3Q9CWU5 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Khdc3Q9CWU5 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Khdc3Q9CWU5 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Khdc3Q9CWU5 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Khdc3Q9CWU5 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Khdc3Q9CWU5 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Khdc3Q9CWU5 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Khdc3Q9CWU5 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Khdc3Q9CWU5 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Khdc3Q9CWU5 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Khdc3Q9CWU5 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Khdc3Q9CWU5 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Khdc3Q9CWU5 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Khdc3Q9CWU5 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
Khdc3Q9CWU5 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Khdc3Q9CWU5 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Khdc3Q9CWU5 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Khdc3Q9CWU5 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.43□□□□□ -0.42
Khdc3Q9CWU5 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Khdc3Q9CWU5 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC12.43□□□□□ -0.42
Khdc3Q9CWU5 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Khdc3Q9CWU5 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Khdc3Q9CWU5 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC12.43□□□□□ -0.42
Khdc3Q9CWU5 Gm9794-201ENSMUST00000202370 423 ntBASIC12.43□□□□□ -0.42
Khdc3Q9CWU5 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Khdc3Q9CWU5 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Khdc3Q9CWU5 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Khdc3Q9CWU5 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Khdc3Q9CWU5 Gm16372-201ENSMUST00000073088 450 ntBASIC12.43□□□□□ -0.42
Khdc3Q9CWU5 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Khdc3Q9CWU5 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
Khdc3Q9CWU5 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Khdc3Q9CWU5 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Khdc3Q9CWU5 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Khdc3Q9CWU5 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Khdc3Q9CWU5 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Khdc3Q9CWU5 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Khdc3Q9CWU5 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.43□□□□□ -0.42
Khdc3Q9CWU5 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Khdc3Q9CWU5 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Khdc3Q9CWU5 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.43□□□□□ -0.42
Khdc3Q9CWU5 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Khdc3Q9CWU5 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Khdc3Q9CWU5 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.43□□□□□ -0.42
Khdc3Q9CWU5 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.43□□□□□ -0.42
Khdc3Q9CWU5 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Khdc3Q9CWU5 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Khdc3Q9CWU5 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Khdc3Q9CWU5 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Khdc3Q9CWU5 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Khdc3Q9CWU5 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Khdc3Q9CWU5 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Khdc3Q9CWU5 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Khdc3Q9CWU5 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Khdc3Q9CWU5 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Khdc3Q9CWU5 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Khdc3Q9CWU5 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Khdc3Q9CWU5 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.42□□□□□ -0.42
Khdc3Q9CWU5 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Khdc3Q9CWU5 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Khdc3Q9CWU5 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Khdc3Q9CWU5 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Khdc3Q9CWU5 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Khdc3Q9CWU5 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Khdc3Q9CWU5 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Khdc3Q9CWU5 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Khdc3Q9CWU5 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Khdc3Q9CWU5 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Khdc3Q9CWU5 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Khdc3Q9CWU5 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Khdc3Q9CWU5 Gm13612-201ENSMUST00000119276 390 ntBASIC12.42□□□□□ -0.42
Khdc3Q9CWU5 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Khdc3Q9CWU5 Ighv5-13-201ENSMUST00000193550 290 ntBASIC12.42□□□□□ -0.42
Khdc3Q9CWU5 Gm7287-201ENSMUST00000205267 602 ntBASIC12.42□□□□□ -0.42
Khdc3Q9CWU5 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Khdc3Q9CWU5 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Khdc3Q9CWU5 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Khdc3Q9CWU5 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Khdc3Q9CWU5 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Khdc3Q9CWU5 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Khdc3Q9CWU5 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Khdc3Q9CWU5 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Khdc3Q9CWU5 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Khdc3Q9CWU5 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Khdc3Q9CWU5 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Khdc3Q9CWU5 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms