Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim8Q99PJ2 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC12.72□□□□□ -0.37
Trim8Q99PJ2 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim8Q99PJ2 Mir8102-201ENSMUST00000184148 139 ntBASIC12.72□□□□□ -0.37
Trim8Q99PJ2 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC12.72□□□□□ -0.37
Trim8Q99PJ2 AC139580.1-202ENSMUST00000223574 928 ntBASIC12.72□□□□□ -0.37
Trim8Q99PJ2 AC238811.1-201ENSMUST00000225302 441 ntBASIC12.72□□□□□ -0.37
Trim8Q99PJ2 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim8Q99PJ2 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Trim8Q99PJ2 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim8Q99PJ2 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.72□□□□□ -0.37
Trim8Q99PJ2 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim8Q99PJ2 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim8Q99PJ2 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim8Q99PJ2 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim8Q99PJ2 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim8Q99PJ2 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim8Q99PJ2 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trim8Q99PJ2 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trim8Q99PJ2 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.72□□□□□ -0.37
Trim8Q99PJ2 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.72□□□□□ -0.37
Trim8Q99PJ2 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim8Q99PJ2 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim8Q99PJ2 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim8Q99PJ2 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim8Q99PJ2 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim8Q99PJ2 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim8Q99PJ2 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim8Q99PJ2 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim8Q99PJ2 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.71□□□□□ -0.37
Trim8Q99PJ2 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC12.71□□□□□ -0.37
Trim8Q99PJ2 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.71□□□□□ -0.37
Trim8Q99PJ2 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim8Q99PJ2 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim8Q99PJ2 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim8Q99PJ2 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trim8Q99PJ2 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Trim8Q99PJ2 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.71□□□□□ -0.37
Trim8Q99PJ2 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.71□□□□□ -0.37
Trim8Q99PJ2 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC12.71□□□□□ -0.37
Trim8Q99PJ2 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trim8Q99PJ2 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.71□□□□□ -0.37
Trim8Q99PJ2 Mir6977-201ENSMUST00000184960 64 ntBASIC12.71□□□□□ -0.37
Trim8Q99PJ2 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.71□□□□□ -0.37
Trim8Q99PJ2 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim8Q99PJ2 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.71□□□□□ -0.37
Trim8Q99PJ2 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.71□□□□□ -0.37
Trim8Q99PJ2 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trim8Q99PJ2 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trim8Q99PJ2 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim8Q99PJ2 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim8Q99PJ2 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim8Q99PJ2 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim8Q99PJ2 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim8Q99PJ2 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Trim8Q99PJ2 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim8Q99PJ2 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Trim8Q99PJ2 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim8Q99PJ2 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim8Q99PJ2 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.71□□□□□ -0.38
Trim8Q99PJ2 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
Trim8Q99PJ2 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim8Q99PJ2 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim8Q99PJ2 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Trim8Q99PJ2 Gm13127-201ENSMUST00000118978 1389 ntBASIC12.7□□□□□ -0.38
Trim8Q99PJ2 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim8Q99PJ2 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim8Q99PJ2 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim8Q99PJ2 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim8Q99PJ2 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trim8Q99PJ2 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim8Q99PJ2 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim8Q99PJ2 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim8Q99PJ2 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trim8Q99PJ2 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.7□□□□□ -0.38
Trim8Q99PJ2 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Trim8Q99PJ2 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.7□□□□□ -0.38
Trim8Q99PJ2 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim8Q99PJ2 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC12.7□□□□□ -0.38
Trim8Q99PJ2 Gm26464-201ENSMUST00000157094 305 ntBASIC12.7□□□□□ -0.38
Trim8Q99PJ2 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim8Q99PJ2 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC12.7□□□□□ -0.38
Trim8Q99PJ2 Gm19931-201ENSMUST00000198920 368 ntBASIC12.7□□□□□ -0.38
Trim8Q99PJ2 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC12.7□□□□□ -0.38
Trim8Q99PJ2 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC12.7□□□□□ -0.38
Trim8Q99PJ2 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC12.7□□□□□ -0.38
Trim8Q99PJ2 AC125206.2-201ENSMUST00000217454 574 ntBASIC12.7□□□□□ -0.38
Trim8Q99PJ2 AC165157.4-201ENSMUST00000220587 139 ntBASIC12.7□□□□□ -0.38
Trim8Q99PJ2 CT025535.1-201ENSMUST00000227172 491 ntBASIC12.7□□□□□ -0.38
Trim8Q99PJ2 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim8Q99PJ2 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim8Q99PJ2 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim8Q99PJ2 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim8Q99PJ2 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.7□□□□□ -0.38
Trim8Q99PJ2 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim8Q99PJ2 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Trim8Q99PJ2 Pck2-205ENSMUST00000226352 2784 ntBASIC12.7□□□□□ -0.38
Trim8Q99PJ2 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim8Q99PJ2 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim8Q99PJ2 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms