Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Col25a1Q99MQ5 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Col25a1Q99MQ5 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col25a1Q99MQ5 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col25a1Q99MQ5 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Col25a1Q99MQ5 Sertm1-202ENSMUST00000162201 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col25a1Q99MQ5 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Col25a1Q99MQ5 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Col25a1Q99MQ5 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col25a1Q99MQ5 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Col25a1Q99MQ5 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col25a1Q99MQ5 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col25a1Q99MQ5 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col25a1Q99MQ5 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC13.41□□□□□ -0.26
Col25a1Q99MQ5 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col25a1Q99MQ5 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Col25a1Q99MQ5 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col25a1Q99MQ5 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Col25a1Q99MQ5 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Col25a1Q99MQ5 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Col25a1Q99MQ5 Gm14350-201ENSMUST00000116642 640 ntBASIC13.41□□□□□ -0.26
Col25a1Q99MQ5 Gm11980-201ENSMUST00000121445 986 ntBASIC13.41□□□□□ -0.26
Col25a1Q99MQ5 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC13.41□□□□□ -0.26
Col25a1Q99MQ5 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Col25a1Q99MQ5 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC13.41□□□□□ -0.26
Col25a1Q99MQ5 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col25a1Q99MQ5 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC13.41□□□□□ -0.26
Col25a1Q99MQ5 CT009713.8-202ENSMUST00000224732 385 ntBASIC13.41□□□□□ -0.26
Col25a1Q99MQ5 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Col25a1Q99MQ5 Mir483-201ENSMUST00000093631 73 ntBASIC13.41□□□□□ -0.26
Col25a1Q99MQ5 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col25a1Q99MQ5 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col25a1Q99MQ5 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Col25a1Q99MQ5 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Col25a1Q99MQ5 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.41□□□□□ -0.26
Col25a1Q99MQ5 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.41□□□□□ -0.26
Col25a1Q99MQ5 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col25a1Q99MQ5 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col25a1Q99MQ5 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col25a1Q99MQ5 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col25a1Q99MQ5 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC13.41□□□□□ -0.26
Col25a1Q99MQ5 AC168058.1-201ENSMUST00000219521 2282 ntBASIC13.41□□□□□ -0.26
Col25a1Q99MQ5 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col25a1Q99MQ5 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col25a1Q99MQ5 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Col25a1Q99MQ5 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
Col25a1Q99MQ5 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col25a1Q99MQ5 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC13.41□□□□□ -0.26
Col25a1Q99MQ5 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.4□□□□□ -0.26
Col25a1Q99MQ5 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col25a1Q99MQ5 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Col25a1Q99MQ5 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col25a1Q99MQ5 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Col25a1Q99MQ5 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col25a1Q99MQ5 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Col25a1Q99MQ5 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.4□□□□□ -0.26
Col25a1Q99MQ5 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Col25a1Q99MQ5 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col25a1Q99MQ5 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC13.4□□□□□ -0.26
Col25a1Q99MQ5 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col25a1Q99MQ5 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Col25a1Q99MQ5 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Col25a1Q99MQ5 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col25a1Q99MQ5 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Col25a1Q99MQ5 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col25a1Q99MQ5 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col25a1Q99MQ5 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC13.4□□□□□ -0.26
Col25a1Q99MQ5 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC13.4□□□□□ -0.26
Col25a1Q99MQ5 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col25a1Q99MQ5 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
Col25a1Q99MQ5 Mir1901-201ENSMUST00000122616 78 ntBASIC13.4□□□□□ -0.26
Col25a1Q99MQ5 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Col25a1Q99MQ5 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Col25a1Q99MQ5 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC13.4□□□□□ -0.26
Col25a1Q99MQ5 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC13.4□□□□□ -0.26
Col25a1Q99MQ5 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col25a1Q99MQ5 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col25a1Q99MQ5 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC13.4□□□□□ -0.26
Col25a1Q99MQ5 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC13.4□□□□□ -0.26
Col25a1Q99MQ5 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC13.4□□□□□ -0.26
Col25a1Q99MQ5 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Col25a1Q99MQ5 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Col25a1Q99MQ5 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC13.4□□□□□ -0.26
Col25a1Q99MQ5 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col25a1Q99MQ5 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col25a1Q99MQ5 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col25a1Q99MQ5 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col25a1Q99MQ5 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col25a1Q99MQ5 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Col25a1Q99MQ5 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col25a1Q99MQ5 Gm10040-201ENSMUST00000080726 1662 ntBASIC13.4□□□□□ -0.26
Col25a1Q99MQ5 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col25a1Q99MQ5 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Col25a1Q99MQ5 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.4□□□□□ -0.26
Col25a1Q99MQ5 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.27
Col25a1Q99MQ5 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Col25a1Q99MQ5 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.4□□□□□ -0.27
Col25a1Q99MQ5 Gm4366-201ENSMUST00000201488 1342 ntBASIC13.39□□□□□ -0.27
Col25a1Q99MQ5 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col25a1Q99MQ5 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 79 ms