Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx6-1Q99MA9 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx6-1Q99MA9 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC12.16□□□□□ -0.46
Nkx6-1Q99MA9 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.16□□□□□ -0.46
Nkx6-1Q99MA9 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC12.16□□□□□ -0.46
Nkx6-1Q99MA9 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx6-1Q99MA9 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx6-1Q99MA9 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx6-1Q99MA9 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx6-1Q99MA9 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx6-1Q99MA9 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx6-1Q99MA9 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx6-1Q99MA9 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx6-1Q99MA9 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx6-1Q99MA9 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx6-1Q99MA9 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx6-1Q99MA9 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx6-1Q99MA9 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC12.16□□□□□ -0.46
Nkx6-1Q99MA9 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx6-1Q99MA9 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC12.15□□□□□ -0.46
Nkx6-1Q99MA9 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx6-1Q99MA9 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx6-1Q99MA9 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx6-1Q99MA9 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Nkx6-1Q99MA9 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx6-1Q99MA9 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.15□□□□□ -0.46
Nkx6-1Q99MA9 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx6-1Q99MA9 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx6-1Q99MA9 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx6-1Q99MA9 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.15□□□□□ -0.46
Nkx6-1Q99MA9 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx6-1Q99MA9 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx6-1Q99MA9 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.15□□□□□ -0.46
Nkx6-1Q99MA9 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx6-1Q99MA9 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx6-1Q99MA9 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx6-1Q99MA9 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC12.15□□□□□ -0.46
Nkx6-1Q99MA9 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Nkx6-1Q99MA9 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC12.15□□□□□ -0.46
Nkx6-1Q99MA9 Gm22121-201ENSMUST00000175148 54 ntBASIC12.15□□□□□ -0.46
Nkx6-1Q99MA9 Gm44136-201ENSMUST00000203819 1106 ntBASIC12.15□□□□□ -0.46
Nkx6-1Q99MA9 Gm44651-201ENSMUST00000207343 372 ntBASIC12.15□□□□□ -0.46
Nkx6-1Q99MA9 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC12.15□□□□□ -0.46
Nkx6-1Q99MA9 Gm8712-201ENSMUST00000221090 701 ntBASIC12.15□□□□□ -0.46
Nkx6-1Q99MA9 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.15□□□□□ -0.46
Nkx6-1Q99MA9 Gm22058-201ENSMUST00000083393 310 ntBASIC12.15□□□□□ -0.46
Nkx6-1Q99MA9 Gm10702-201ENSMUST00000098929 1268 ntBASIC12.15□□□□□ -0.46
Nkx6-1Q99MA9 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12.15□□□□□ -0.46
Nkx6-1Q99MA9 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx6-1Q99MA9 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Nkx6-1Q99MA9 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Nkx6-1Q99MA9 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx6-1Q99MA9 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx6-1Q99MA9 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx6-1Q99MA9 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx6-1Q99MA9 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.47
Nkx6-1Q99MA9 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Nkx6-1Q99MA9 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx6-1Q99MA9 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx6-1Q99MA9 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.14□□□□□ -0.47
Nkx6-1Q99MA9 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx6-1Q99MA9 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx6-1Q99MA9 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx6-1Q99MA9 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx6-1Q99MA9 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx6-1Q99MA9 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx6-1Q99MA9 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx6-1Q99MA9 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx6-1Q99MA9 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx6-1Q99MA9 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.14□□□□□ -0.47
Nkx6-1Q99MA9 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.14□□□□□ -0.47
Nkx6-1Q99MA9 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx6-1Q99MA9 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Nkx6-1Q99MA9 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.14□□□□□ -0.47
Nkx6-1Q99MA9 Gm9550-201ENSMUST00000161130 862 ntBASIC12.14□□□□□ -0.47
Nkx6-1Q99MA9 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Nkx6-1Q99MA9 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.14□□□□□ -0.47
Nkx6-1Q99MA9 Gm7467-201ENSMUST00000185173 652 ntBASIC12.14□□□□□ -0.47
Nkx6-1Q99MA9 Gm37835-201ENSMUST00000193305 361 ntBASIC12.14□□□□□ -0.47
Nkx6-1Q99MA9 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.14□□□□□ -0.47
Nkx6-1Q99MA9 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Nkx6-1Q99MA9 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx6-1Q99MA9 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx6-1Q99MA9 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx6-1Q99MA9 AC126444.1-201ENSMUST00000225938 1768 ntBASIC12.14□□□□□ -0.47
Nkx6-1Q99MA9 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx6-1Q99MA9 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx6-1Q99MA9 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx6-1Q99MA9 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Nkx6-1Q99MA9 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Nkx6-1Q99MA9 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx6-1Q99MA9 Gm37297-201ENSMUST00000192974 2384 ntBASIC12.14□□□□□ -0.47
Nkx6-1Q99MA9 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx6-1Q99MA9 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx6-1Q99MA9 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx6-1Q99MA9 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx6-1Q99MA9 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx6-1Q99MA9 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx6-1Q99MA9 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx6-1Q99MA9 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms