Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
Cdk5rap3Q99LM2 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC13.43□□□□□ -0.26
Cdk5rap3Q99LM2 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cdk5rap3Q99LM2 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cdk5rap3Q99LM2 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cdk5rap3Q99LM2 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cdk5rap3Q99LM2 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Cdk5rap3Q99LM2 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC13.43□□□□□ -0.26
Cdk5rap3Q99LM2 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC13.43□□□□□ -0.26
Cdk5rap3Q99LM2 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
Cdk5rap3Q99LM2 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Cdk5rap3Q99LM2 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cdk5rap3Q99LM2 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cdk5rap3Q99LM2 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC13.42□□□□□ -0.26
Cdk5rap3Q99LM2 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC13.42□□□□□ -0.26
Cdk5rap3Q99LM2 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cdk5rap3Q99LM2 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cdk5rap3Q99LM2 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdk5rap3Q99LM2 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdk5rap3Q99LM2 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdk5rap3Q99LM2 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdk5rap3Q99LM2 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdk5rap3Q99LM2 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdk5rap3Q99LM2 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cdk5rap3Q99LM2 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC13.42□□□□□ -0.26
Cdk5rap3Q99LM2 Gm12341-201ENSMUST00000119724 503 ntBASIC13.42□□□□□ -0.26
Cdk5rap3Q99LM2 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cdk5rap3Q99LM2 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Cdk5rap3Q99LM2 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdk5rap3Q99LM2 Gm25927-201ENSMUST00000175058 117 ntBASIC13.42□□□□□ -0.26
Cdk5rap3Q99LM2 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC13.42□□□□□ -0.26
Cdk5rap3Q99LM2 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC13.42□□□□□ -0.26
Cdk5rap3Q99LM2 Gm6218-201ENSMUST00000219812 628 ntBASIC13.42□□□□□ -0.26
Cdk5rap3Q99LM2 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdk5rap3Q99LM2 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdk5rap3Q99LM2 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdk5rap3Q99LM2 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cdk5rap3Q99LM2 Gm44094-201ENSMUST00000204703 2030 ntBASIC13.42□□□□□ -0.26
Cdk5rap3Q99LM2 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
Cdk5rap3Q99LM2 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdk5rap3Q99LM2 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdk5rap3Q99LM2 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC13.42□□□□□ -0.26
Cdk5rap3Q99LM2 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Cdk5rap3Q99LM2 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
Cdk5rap3Q99LM2 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Cdk5rap3Q99LM2 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdk5rap3Q99LM2 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC13.41□□□□□ -0.26
Cdk5rap3Q99LM2 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cdk5rap3Q99LM2 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cdk5rap3Q99LM2 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC13.41□□□□□ -0.26
Cdk5rap3Q99LM2 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdk5rap3Q99LM2 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC13.41□□□□□ -0.26
Cdk5rap3Q99LM2 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdk5rap3Q99LM2 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Cdk5rap3Q99LM2 Gm7558-201ENSMUST00000193221 1165 ntBASIC13.41□□□□□ -0.26
Cdk5rap3Q99LM2 Gm44397-201ENSMUST00000195950 113 ntBASIC13.41□□□□□ -0.26
Cdk5rap3Q99LM2 Gm18307-201ENSMUST00000206864 949 ntBASIC13.41□□□□□ -0.26
Cdk5rap3Q99LM2 Gm6983-201ENSMUST00000214912 628 ntBASIC13.41□□□□□ -0.26
Cdk5rap3Q99LM2 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdk5rap3Q99LM2 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC13.41□□□□□ -0.26
Cdk5rap3Q99LM2 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdk5rap3Q99LM2 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdk5rap3Q99LM2 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdk5rap3Q99LM2 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdk5rap3Q99LM2 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdk5rap3Q99LM2 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdk5rap3Q99LM2 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Cdk5rap3Q99LM2 Gm43321-201ENSMUST00000198897 2409 ntBASIC13.41□□□□□ -0.26
Cdk5rap3Q99LM2 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdk5rap3Q99LM2 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Cdk5rap3Q99LM2 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Cdk5rap3Q99LM2 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdk5rap3Q99LM2 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdk5rap3Q99LM2 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdk5rap3Q99LM2 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdk5rap3Q99LM2 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC13.4□□□□□ -0.26
Cdk5rap3Q99LM2 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
Cdk5rap3Q99LM2 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdk5rap3Q99LM2 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Cdk5rap3Q99LM2 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdk5rap3Q99LM2 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdk5rap3Q99LM2 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdk5rap3Q99LM2 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdk5rap3Q99LM2 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdk5rap3Q99LM2 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC13.4□□□□□ -0.26
Cdk5rap3Q99LM2 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Cdk5rap3Q99LM2 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC13.4□□□□□ -0.26
Cdk5rap3Q99LM2 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC13.4□□□□□ -0.26
Cdk5rap3Q99LM2 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Cdk5rap3Q99LM2 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC13.4□□□□□ -0.26
Cdk5rap3Q99LM2 AC122305.4-201ENSMUST00000216159 1206 ntBASIC13.4□□□□□ -0.26
Cdk5rap3Q99LM2 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdk5rap3Q99LM2 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdk5rap3Q99LM2 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdk5rap3Q99LM2 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cdk5rap3Q99LM2 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdk5rap3Q99LM2 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Cdk5rap3Q99LM2 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cdk5rap3Q99LM2 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdk5rap3Q99LM2 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms