Protein–RNA interactions for Protein: Q91Y06

Pcdhb13, Protocadherin beta 13, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb13Q91Y06 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13.07□□□□□ -0.32
Pcdhb13Q91Y06 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Pcdhb13Q91Y06 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb13Q91Y06 Gm44094-201ENSMUST00000204703 2030 ntBASIC13.07□□□□□ -0.32
Pcdhb13Q91Y06 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb13Q91Y06 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb13Q91Y06 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC13.07□□□□□ -0.32
Pcdhb13Q91Y06 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC13.07□□□□□ -0.32
Pcdhb13Q91Y06 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb13Q91Y06 Il4-204ENSMUST00000150568 605 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb13Q91Y06 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb13Q91Y06 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb13Q91Y06 Gm16973-201ENSMUST00000180682 1299 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb13Q91Y06 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC13.07□□□□□ -0.32
Pcdhb13Q91Y06 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb13Q91Y06 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb13Q91Y06 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Pcdhb13Q91Y06 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb13Q91Y06 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Pcdhb13Q91Y06 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb13Q91Y06 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb13Q91Y06 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Pcdhb13Q91Y06 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
Pcdhb13Q91Y06 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb13Q91Y06 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb13Q91Y06 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb13Q91Y06 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb13Q91Y06 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb13Q91Y06 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb13Q91Y06 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb13Q91Y06 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb13Q91Y06 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Pcdhb13Q91Y06 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb13Q91Y06 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb13Q91Y06 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb13Q91Y06 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb13Q91Y06 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb13Q91Y06 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb13Q91Y06 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb13Q91Y06 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC13.06□□□□□ -0.32
Pcdhb13Q91Y06 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb13Q91Y06 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb13Q91Y06 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb13Q91Y06 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb13Q91Y06 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb13Q91Y06 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb13Q91Y06 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb13Q91Y06 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb13Q91Y06 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb13Q91Y06 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb13Q91Y06 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb13Q91Y06 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb13Q91Y06 Proscos-202ENSMUST00000178990 666 ntBASIC13.06□□□□□ -0.32
Pcdhb13Q91Y06 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
Pcdhb13Q91Y06 Gm28693-202ENSMUST00000190758 331 ntBASIC13.06□□□□□ -0.32
Pcdhb13Q91Y06 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC13.06□□□□□ -0.32
Pcdhb13Q91Y06 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC13.06□□□□□ -0.32
Pcdhb13Q91Y06 CT030657.3-201ENSMUST00000222707 1200 ntBASIC13.06□□□□□ -0.32
Pcdhb13Q91Y06 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb13Q91Y06 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Pcdhb13Q91Y06 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb13Q91Y06 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb13Q91Y06 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC13.06□□□□□ -0.32
Pcdhb13Q91Y06 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb13Q91Y06 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC13.06□□□□□ -0.32
Pcdhb13Q91Y06 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb13Q91Y06 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb13Q91Y06 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb13Q91Y06 Gm43045-201ENSMUST00000198725 2095 ntBASIC13.06□□□□□ -0.32
Pcdhb13Q91Y06 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb13Q91Y06 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb13Q91Y06 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb13Q91Y06 Gm38049-201ENSMUST00000195698 1372 ntBASIC13.06□□□□□ -0.32
Pcdhb13Q91Y06 Zkscan3-207ENSMUST00000223831 2101 ntBASIC13.06□□□□□ -0.32
Pcdhb13Q91Y06 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb13Q91Y06 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb13Q91Y06 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC13.05□□□□□ -0.32
Pcdhb13Q91Y06 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Pcdhb13Q91Y06 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb13Q91Y06 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb13Q91Y06 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Pcdhb13Q91Y06 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb13Q91Y06 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
Pcdhb13Q91Y06 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb13Q91Y06 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb13Q91Y06 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC13.05□□□□□ -0.32
Pcdhb13Q91Y06 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC13.05□□□□□ -0.32
Pcdhb13Q91Y06 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb13Q91Y06 Gm11618-201ENSMUST00000117946 267 ntBASIC13.05□□□□□ -0.32
Pcdhb13Q91Y06 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC13.05□□□□□ -0.32
Pcdhb13Q91Y06 Gm10156-201ENSMUST00000122364 462 ntBASIC13.05□□□□□ -0.32
Pcdhb13Q91Y06 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb13Q91Y06 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb13Q91Y06 G530012D18Rik-201ENSMUST00000178024 420 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Pcdhb13Q91Y06 Gm9124-201ENSMUST00000191789 1092 ntBASIC13.05□□□□□ -0.32
Pcdhb13Q91Y06 Gm9113-201ENSMUST00000192510 1018 ntBASIC13.05□□□□□ -0.32
Pcdhb13Q91Y06 Gm9131-201ENSMUST00000193557 1089 ntBASIC13.05□□□□□ -0.32
Pcdhb13Q91Y06 Gm9121-201ENSMUST00000193749 1071 ntBASIC13.05□□□□□ -0.32
Pcdhb13Q91Y06 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb13Q91Y06 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms