Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb18Q91Y02 Gm7993-201ENSMUST00000200970 1384 ntBASIC13.56□□□□□ -0.24
Pcdhb18Q91Y02 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.56□□□□□ -0.24
Pcdhb18Q91Y02 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC13.56□□□□□ -0.24
Pcdhb18Q91Y02 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Pcdhb18Q91Y02 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC13.56□□□□□ -0.24
Pcdhb18Q91Y02 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Pcdhb18Q91Y02 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb18Q91Y02 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.56□□□□□ -0.24
Pcdhb18Q91Y02 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb18Q91Y02 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb18Q91Y02 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb18Q91Y02 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb18Q91Y02 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb18Q91Y02 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb18Q91Y02 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb18Q91Y02 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb18Q91Y02 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Pcdhb18Q91Y02 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb18Q91Y02 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb18Q91Y02 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.55□□□□□ -0.24
Pcdhb18Q91Y02 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb18Q91Y02 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb18Q91Y02 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb18Q91Y02 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb18Q91Y02 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb18Q91Y02 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC13.55□□□□□ -0.24
Pcdhb18Q91Y02 Gm12749-201ENSMUST00000122138 1159 ntBASIC13.55□□□□□ -0.24
Pcdhb18Q91Y02 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC13.55□□□□□ -0.24
Pcdhb18Q91Y02 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb18Q91Y02 Gm8738-201ENSMUST00000172606 329 ntBASIC13.55□□□□□ -0.24
Pcdhb18Q91Y02 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC13.55□□□□□ -0.24
Pcdhb18Q91Y02 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC13.55□□□□□ -0.24
Pcdhb18Q91Y02 CT025533.2-201ENSMUST00000228715 1248 ntBASIC13.55□□□□□ -0.24
Pcdhb18Q91Y02 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb18Q91Y02 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb18Q91Y02 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Pcdhb18Q91Y02 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb18Q91Y02 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.55□□□□□ -0.24
Pcdhb18Q91Y02 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb18Q91Y02 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb18Q91Y02 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb18Q91Y02 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Pcdhb18Q91Y02 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb18Q91Y02 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Pcdhb18Q91Y02 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb18Q91Y02 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Pcdhb18Q91Y02 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb18Q91Y02 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Pcdhb18Q91Y02 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb18Q91Y02 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb18Q91Y02 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb18Q91Y02 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Pcdhb18Q91Y02 Gm28386-201ENSMUST00000189147 1849 ntBASIC13.55□□□□□ -0.24
Pcdhb18Q91Y02 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Pcdhb18Q91Y02 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb18Q91Y02 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb18Q91Y02 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb18Q91Y02 AC238940.1-201ENSMUST00000225106 1858 ntBASIC13.55□□□□□ -0.24
Pcdhb18Q91Y02 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb18Q91Y02 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb18Q91Y02 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb18Q91Y02 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb18Q91Y02 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb18Q91Y02 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Pcdhb18Q91Y02 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb18Q91Y02 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb18Q91Y02 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb18Q91Y02 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb18Q91Y02 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb18Q91Y02 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb18Q91Y02 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
Pcdhb18Q91Y02 Gm11222-201ENSMUST00000119005 738 ntBASIC13.54□□□□□ -0.24
Pcdhb18Q91Y02 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb18Q91Y02 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb18Q91Y02 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb18Q91Y02 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC13.54□□□□□ -0.24
Pcdhb18Q91Y02 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Pcdhb18Q91Y02 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC13.54□□□□□ -0.24
Pcdhb18Q91Y02 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb18Q91Y02 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Pcdhb18Q91Y02 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb18Q91Y02 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb18Q91Y02 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb18Q91Y02 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
Pcdhb18Q91Y02 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb18Q91Y02 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.54□□□□□ -0.24
Pcdhb18Q91Y02 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb18Q91Y02 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb18Q91Y02 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb18Q91Y02 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb18Q91Y02 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb18Q91Y02 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
Pcdhb18Q91Y02 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb18Q91Y02 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC13.53□□□□□ -0.24
Pcdhb18Q91Y02 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb18Q91Y02 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb18Q91Y02 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb18Q91Y02 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb18Q91Y02 Gm12502-201ENSMUST00000120197 444 ntBASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms