Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhga11Q91XY8 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Pcdhga11Q91XY8 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhga11Q91XY8 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhga11Q91XY8 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhga11Q91XY8 Gm12341-201ENSMUST00000119724 503 ntBASIC12.57□□□□□ -0.4
Pcdhga11Q91XY8 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC12.57□□□□□ -0.4
Pcdhga11Q91XY8 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhga11Q91XY8 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhga11Q91XY8 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhga11Q91XY8 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhga11Q91XY8 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhga11Q91XY8 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhga11Q91XY8 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhga11Q91XY8 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhga11Q91XY8 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhga11Q91XY8 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhga11Q91XY8 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Pcdhga11Q91XY8 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhga11Q91XY8 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhga11Q91XY8 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Pcdhga11Q91XY8 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhga11Q91XY8 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhga11Q91XY8 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
Pcdhga11Q91XY8 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhga11Q91XY8 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhga11Q91XY8 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhga11Q91XY8 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Pcdhga11Q91XY8 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Pcdhga11Q91XY8 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
Pcdhga11Q91XY8 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhga11Q91XY8 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhga11Q91XY8 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.56□□□□□ -0.4
Pcdhga11Q91XY8 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhga11Q91XY8 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhga11Q91XY8 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhga11Q91XY8 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhga11Q91XY8 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhga11Q91XY8 Gm6447-201ENSMUST00000118905 835 ntBASIC12.56□□□□□ -0.4
Pcdhga11Q91XY8 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhga11Q91XY8 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhga11Q91XY8 Mir6392-201ENSMUST00000184924 108 ntBASIC12.56□□□□□ -0.4
Pcdhga11Q91XY8 Gm44397-201ENSMUST00000195950 113 ntBASIC12.56□□□□□ -0.4
Pcdhga11Q91XY8 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC12.56□□□□□ -0.4
Pcdhga11Q91XY8 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC12.56□□□□□ -0.4
Pcdhga11Q91XY8 Gm9908-201ENSMUST00000211534 448 ntBASIC12.56□□□□□ -0.4
Pcdhga11Q91XY8 Gm6983-201ENSMUST00000214912 628 ntBASIC12.56□□□□□ -0.4
Pcdhga11Q91XY8 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.56□□□□□ -0.4
Pcdhga11Q91XY8 AC155286.1-201ENSMUST00000218632 448 ntBASIC12.56□□□□□ -0.4
Pcdhga11Q91XY8 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
Pcdhga11Q91XY8 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhga11Q91XY8 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhga11Q91XY8 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhga11Q91XY8 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhga11Q91XY8 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.56□□□□□ -0.4
Pcdhga11Q91XY8 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhga11Q91XY8 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhga11Q91XY8 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhga11Q91XY8 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhga11Q91XY8 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhga11Q91XY8 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhga11Q91XY8 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhga11Q91XY8 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.56□□□□□ -0.4
Pcdhga11Q91XY8 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.56□□□□□ -0.4
Pcdhga11Q91XY8 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhga11Q91XY8 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhga11Q91XY8 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhga11Q91XY8 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhga11Q91XY8 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhga11Q91XY8 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhga11Q91XY8 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhga11Q91XY8 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Pcdhga11Q91XY8 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhga11Q91XY8 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhga11Q91XY8 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhga11Q91XY8 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.55□□□□□ -0.4
Pcdhga11Q91XY8 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhga11Q91XY8 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhga11Q91XY8 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhga11Q91XY8 Gm11478-201ENSMUST00000117851 599 ntBASIC12.55□□□□□ -0.4
Pcdhga11Q91XY8 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.55□□□□□ -0.4
Pcdhga11Q91XY8 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhga11Q91XY8 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.55□□□□□ -0.4
Pcdhga11Q91XY8 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhga11Q91XY8 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhga11Q91XY8 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhga11Q91XY8 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Pcdhga11Q91XY8 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Pcdhga11Q91XY8 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhga11Q91XY8 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC12.55□□□□□ -0.4
Pcdhga11Q91XY8 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Pcdhga11Q91XY8 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Pcdhga11Q91XY8 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhga11Q91XY8 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhga11Q91XY8 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhga11Q91XY8 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhga11Q91XY8 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhga11Q91XY8 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.55□□□□□ -0.4
Pcdhga11Q91XY8 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.55□□□□□ -0.4
Pcdhga11Q91XY8 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms