Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
TraipQ8VIG6 Gm5639-201ENSMUST00000122305 2403 ntBASIC13.8□□□□□ -0.2
TraipQ8VIG6 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
TraipQ8VIG6 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
TraipQ8VIG6 Gm15236-201ENSMUST00000117309 379 ntBASIC13.8□□□□□ -0.2
TraipQ8VIG6 Gm12058-201ENSMUST00000118614 437 ntBASIC13.8□□□□□ -0.2
TraipQ8VIG6 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC13.8□□□□□ -0.2
TraipQ8VIG6 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC13.8□□□□□ -0.2
TraipQ8VIG6 Tbata-210ENSMUST00000151886 915 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TraipQ8VIG6 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TraipQ8VIG6 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TraipQ8VIG6 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
TraipQ8VIG6 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TraipQ8VIG6 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC13.8□□□□□ -0.2
TraipQ8VIG6 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC13.8□□□□□ -0.2
TraipQ8VIG6 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC13.8□□□□□ -0.2
TraipQ8VIG6 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
TraipQ8VIG6 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
TraipQ8VIG6 AC122371.3-201ENSMUST00000223402 1061 ntBASIC13.8□□□□□ -0.2
TraipQ8VIG6 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TraipQ8VIG6 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
TraipQ8VIG6 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
TraipQ8VIG6 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TraipQ8VIG6 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TraipQ8VIG6 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC13.8□□□□□ -0.2
TraipQ8VIG6 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
TraipQ8VIG6 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TraipQ8VIG6 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TraipQ8VIG6 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TraipQ8VIG6 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.8□□□□□ -0.2
TraipQ8VIG6 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TraipQ8VIG6 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TraipQ8VIG6 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TraipQ8VIG6 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
TraipQ8VIG6 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TraipQ8VIG6 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TraipQ8VIG6 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TraipQ8VIG6 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TraipQ8VIG6 Gm44094-201ENSMUST00000204703 2030 ntBASIC13.8□□□□□ -0.2
TraipQ8VIG6 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
TraipQ8VIG6 Zfp957-201ENSMUST00000040802 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TraipQ8VIG6 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
TraipQ8VIG6 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TraipQ8VIG6 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TraipQ8VIG6 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC13.79□□□□□ -0.2
TraipQ8VIG6 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TraipQ8VIG6 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC13.79□□□□□ -0.2
TraipQ8VIG6 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TraipQ8VIG6 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TraipQ8VIG6 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TraipQ8VIG6 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TraipQ8VIG6 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TraipQ8VIG6 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TraipQ8VIG6 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TraipQ8VIG6 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TraipQ8VIG6 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
TraipQ8VIG6 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TraipQ8VIG6 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TraipQ8VIG6 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TraipQ8VIG6 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC13.79□□□□□ -0.2
TraipQ8VIG6 Gm26083-201ENSMUST00000157904 193 ntBASIC13.79□□□□□ -0.2
TraipQ8VIG6 Gm16296-201ENSMUST00000159905 325 ntBASIC13.79□□□□□ -0.2
TraipQ8VIG6 Gm28195-201ENSMUST00000186992 372 ntBASIC13.79□□□□□ -0.2
TraipQ8VIG6 Gm38000-201ENSMUST00000192390 1215 ntBASIC13.79□□□□□ -0.2
TraipQ8VIG6 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC13.79□□□□□ -0.2
TraipQ8VIG6 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TraipQ8VIG6 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TraipQ8VIG6 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TraipQ8VIG6 Mir339-201ENSMUST00000083659 96 ntBASIC13.79□□□□□ -0.2
TraipQ8VIG6 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
TraipQ8VIG6 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TraipQ8VIG6 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TraipQ8VIG6 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC13.79□□□□□ -0.2
TraipQ8VIG6 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
TraipQ8VIG6 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
TraipQ8VIG6 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TraipQ8VIG6 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.79□□□□□ -0.2
TraipQ8VIG6 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TraipQ8VIG6 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TraipQ8VIG6 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TraipQ8VIG6 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TraipQ8VIG6 Gm37737-201ENSMUST00000195013 1638 ntBASIC13.79□□□□□ -0.2
TraipQ8VIG6 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.79□□□□□ -0.2
TraipQ8VIG6 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TraipQ8VIG6 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC13.78□□□□□ -0.2
TraipQ8VIG6 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TraipQ8VIG6 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TraipQ8VIG6 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TraipQ8VIG6 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TraipQ8VIG6 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
TraipQ8VIG6 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TraipQ8VIG6 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TraipQ8VIG6 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
TraipQ8VIG6 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
TraipQ8VIG6 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.78□□□□□ -0.2
TraipQ8VIG6 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TraipQ8VIG6 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TraipQ8VIG6 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC13.78□□□□□ -0.2
TraipQ8VIG6 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC13.78□□□□□ -0.2
TraipQ8VIG6 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms