Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim60Q8VI40 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim60Q8VI40 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim60Q8VI40 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC13.39□□□□□ -0.27
Trim60Q8VI40 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Trim60Q8VI40 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim60Q8VI40 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim60Q8VI40 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim60Q8VI40 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim60Q8VI40 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim60Q8VI40 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim60Q8VI40 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim60Q8VI40 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim60Q8VI40 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC13.39□□□□□ -0.27
Trim60Q8VI40 Gm16202-201ENSMUST00000117532 544 ntBASIC13.39□□□□□ -0.27
Trim60Q8VI40 Gm13689-201ENSMUST00000119360 685 ntBASIC13.39□□□□□ -0.27
Trim60Q8VI40 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Trim60Q8VI40 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim60Q8VI40 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC13.39□□□□□ -0.27
Trim60Q8VI40 Gm18307-201ENSMUST00000206864 949 ntBASIC13.39□□□□□ -0.27
Trim60Q8VI40 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim60Q8VI40 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim60Q8VI40 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim60Q8VI40 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim60Q8VI40 Gm16372-201ENSMUST00000073088 450 ntBASIC13.39□□□□□ -0.27
Trim60Q8VI40 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Trim60Q8VI40 Gm44241-201ENSMUST00000203230 1662 ntBASIC13.39□□□□□ -0.27
Trim60Q8VI40 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim60Q8VI40 Gm37269-201ENSMUST00000193906 1891 ntBASIC13.39□□□□□ -0.27
Trim60Q8VI40 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim60Q8VI40 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim60Q8VI40 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim60Q8VI40 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC13.39□□□□□ -0.27
Trim60Q8VI40 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim60Q8VI40 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim60Q8VI40 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim60Q8VI40 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim60Q8VI40 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim60Q8VI40 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC13.39□□□□□ -0.27
Trim60Q8VI40 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim60Q8VI40 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Trim60Q8VI40 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.38□□□□□ -0.27
Trim60Q8VI40 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim60Q8VI40 Gm42840-201ENSMUST00000200303 2251 ntBASIC13.38□□□□□ -0.27
Trim60Q8VI40 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
Trim60Q8VI40 Ldb3-207ENSMUST00000227819 1499 ntBASIC13.38□□□□□ -0.27
Trim60Q8VI40 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim60Q8VI40 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Trim60Q8VI40 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim60Q8VI40 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim60Q8VI40 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trim60Q8VI40 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Trim60Q8VI40 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trim60Q8VI40 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim60Q8VI40 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Trim60Q8VI40 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13.38□□□□□ -0.27
Trim60Q8VI40 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC13.38□□□□□ -0.27
Trim60Q8VI40 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC13.38□□□□□ -0.27
Trim60Q8VI40 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trim60Q8VI40 AC156560.2-201ENSMUST00000221232 264 ntBASIC13.38□□□□□ -0.27
Trim60Q8VI40 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim60Q8VI40 Wdyhv1-203ENSMUST00000226889 394 ntBASIC13.38□□□□□ -0.27
Trim60Q8VI40 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim60Q8VI40 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim60Q8VI40 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim60Q8VI40 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trim60Q8VI40 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim60Q8VI40 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trim60Q8VI40 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim60Q8VI40 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim60Q8VI40 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim60Q8VI40 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim60Q8VI40 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Trim60Q8VI40 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim60Q8VI40 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trim60Q8VI40 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim60Q8VI40 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Trim60Q8VI40 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim60Q8VI40 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.38□□□□□ -0.27
Trim60Q8VI40 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Trim60Q8VI40 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim60Q8VI40 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Trim60Q8VI40 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim60Q8VI40 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC13.38□□□□□ -0.27
Trim60Q8VI40 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim60Q8VI40 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim60Q8VI40 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim60Q8VI40 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim60Q8VI40 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim60Q8VI40 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim60Q8VI40 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim60Q8VI40 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim60Q8VI40 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim60Q8VI40 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC13.37□□□□□ -0.27
Trim60Q8VI40 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Trim60Q8VI40 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim60Q8VI40 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim60Q8VI40 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC13.37□□□□□ -0.27
Trim60Q8VI40 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim60Q8VI40 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms