Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Rnf8Q8VC56 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Rnf8Q8VC56 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Rnf8Q8VC56 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf8Q8VC56 Gm12091-201ENSMUST00000146791 830 ntBASIC12.52□□□□□ -0.41
Rnf8Q8VC56 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf8Q8VC56 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC12.52□□□□□ -0.41
Rnf8Q8VC56 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.52□□□□□ -0.41
Rnf8Q8VC56 Gm27701-201ENSMUST00000184498 110 ntBASIC12.52□□□□□ -0.41
Rnf8Q8VC56 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC12.52□□□□□ -0.41
Rnf8Q8VC56 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.52□□□□□ -0.41
Rnf8Q8VC56 AC125117.1-201ENSMUST00000228121 468 ntBASIC12.52□□□□□ -0.41
Rnf8Q8VC56 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf8Q8VC56 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf8Q8VC56 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf8Q8VC56 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Rnf8Q8VC56 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Rnf8Q8VC56 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf8Q8VC56 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Rnf8Q8VC56 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf8Q8VC56 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf8Q8VC56 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf8Q8VC56 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf8Q8VC56 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf8Q8VC56 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf8Q8VC56 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf8Q8VC56 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf8Q8VC56 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.51□□□□□ -0.41
Rnf8Q8VC56 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf8Q8VC56 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.51□□□□□ -0.41
Rnf8Q8VC56 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.51□□□□□ -0.41
Rnf8Q8VC56 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf8Q8VC56 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Rnf8Q8VC56 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf8Q8VC56 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.51□□□□□ -0.41
Rnf8Q8VC56 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Rnf8Q8VC56 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf8Q8VC56 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf8Q8VC56 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf8Q8VC56 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Rnf8Q8VC56 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.51□□□□□ -0.41
Rnf8Q8VC56 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf8Q8VC56 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf8Q8VC56 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf8Q8VC56 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC12.51□□□□□ -0.41
Rnf8Q8VC56 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC12.51□□□□□ -0.41
Rnf8Q8VC56 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf8Q8VC56 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf8Q8VC56 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.51□□□□□ -0.41
Rnf8Q8VC56 Gm26464-201ENSMUST00000157094 305 ntBASIC12.51□□□□□ -0.41
Rnf8Q8VC56 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf8Q8VC56 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.51□□□□□ -0.41
Rnf8Q8VC56 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Rnf8Q8VC56 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.51□□□□□ -0.41
Rnf8Q8VC56 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
Rnf8Q8VC56 Gm6180-201ENSMUST00000065243 498 ntBASIC12.51□□□□□ -0.41
Rnf8Q8VC56 Gm5161-201ENSMUST00000075243 853 ntBASIC12.51□□□□□ -0.41
Rnf8Q8VC56 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf8Q8VC56 Gm24447-201ENSMUST00000083977 338 ntBASIC12.51□□□□□ -0.41
Rnf8Q8VC56 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf8Q8VC56 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf8Q8VC56 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf8Q8VC56 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Rnf8Q8VC56 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Rnf8Q8VC56 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf8Q8VC56 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf8Q8VC56 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf8Q8VC56 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf8Q8VC56 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Rnf8Q8VC56 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf8Q8VC56 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf8Q8VC56 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf8Q8VC56 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf8Q8VC56 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
Rnf8Q8VC56 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf8Q8VC56 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf8Q8VC56 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Rnf8Q8VC56 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Rnf8Q8VC56 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf8Q8VC56 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.5□□□□□ -0.41
Rnf8Q8VC56 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf8Q8VC56 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf8Q8VC56 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf8Q8VC56 Gm14928-201ENSMUST00000120198 477 ntBASIC12.5□□□□□ -0.41
Rnf8Q8VC56 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC12.5□□□□□ -0.41
Rnf8Q8VC56 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf8Q8VC56 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
Rnf8Q8VC56 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf8Q8VC56 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC12.5□□□□□ -0.41
Rnf8Q8VC56 Gm6745-201ENSMUST00000199216 526 ntBASIC12.5□□□□□ -0.41
Rnf8Q8VC56 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf8Q8VC56 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf8Q8VC56 AC238811.3-201ENSMUST00000225422 709 ntBASIC12.5□□□□□ -0.41
Rnf8Q8VC56 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf8Q8VC56 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf8Q8VC56 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf8Q8VC56 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.5□□□□□ -0.41
Rnf8Q8VC56 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf8Q8VC56 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf8Q8VC56 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms