Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rpap2Q8VC34 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rpap2Q8VC34 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rpap2Q8VC34 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rpap2Q8VC34 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rpap2Q8VC34 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Rpap2Q8VC34 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rpap2Q8VC34 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rpap2Q8VC34 Gm14921-201ENSMUST00000118643 908 ntBASIC14.2□□□□□ -0.14
Rpap2Q8VC34 Gm14704-201ENSMUST00000120300 874 ntBASIC14.2□□□□□ -0.14
Rpap2Q8VC34 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rpap2Q8VC34 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC14.2□□□□□ -0.14
Rpap2Q8VC34 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rpap2Q8VC34 Gm8099-201ENSMUST00000200510 742 ntBASIC14.2□□□□□ -0.14
Rpap2Q8VC34 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC14.2□□□□□ -0.14
Rpap2Q8VC34 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rpap2Q8VC34 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rpap2Q8VC34 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rpap2Q8VC34 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC14.2□□□□□ -0.14
Rpap2Q8VC34 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rpap2Q8VC34 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rpap2Q8VC34 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rpap2Q8VC34 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rpap2Q8VC34 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rpap2Q8VC34 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rpap2Q8VC34 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Rpap2Q8VC34 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rpap2Q8VC34 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rpap2Q8VC34 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Rpap2Q8VC34 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC14.2□□□□□ -0.14
Rpap2Q8VC34 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rpap2Q8VC34 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Rpap2Q8VC34 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rpap2Q8VC34 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC14.19□□□□□ -0.14
Rpap2Q8VC34 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rpap2Q8VC34 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rpap2Q8VC34 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rpap2Q8VC34 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rpap2Q8VC34 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rpap2Q8VC34 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Rpap2Q8VC34 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rpap2Q8VC34 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Rpap2Q8VC34 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rpap2Q8VC34 Snord83b-201ENSMUST00000104546 94 ntBASIC14.19□□□□□ -0.14
Rpap2Q8VC34 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rpap2Q8VC34 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Rpap2Q8VC34 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC14.19□□□□□ -0.14
Rpap2Q8VC34 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC14.19□□□□□ -0.14
Rpap2Q8VC34 Gm27682-201ENSMUST00000183930 110 ntBASIC14.19□□□□□ -0.14
Rpap2Q8VC34 Gm18187-201ENSMUST00000196476 984 ntBASIC14.19□□□□□ -0.14
Rpap2Q8VC34 Gm18916-201ENSMUST00000198264 1246 ntBASIC14.19□□□□□ -0.14
Rpap2Q8VC34 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rpap2Q8VC34 Mir339-201ENSMUST00000083659 96 ntBASIC14.19□□□□□ -0.14
Rpap2Q8VC34 Gm10268-201ENSMUST00000085340 555 ntBASIC14.19□□□□□ -0.14
Rpap2Q8VC34 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rpap2Q8VC34 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Rpap2Q8VC34 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rpap2Q8VC34 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Rpap2Q8VC34 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
Rpap2Q8VC34 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Rpap2Q8VC34 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Rpap2Q8VC34 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Rpap2Q8VC34 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rpap2Q8VC34 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rpap2Q8VC34 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Rpap2Q8VC34 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rpap2Q8VC34 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rpap2Q8VC34 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC14.18□□□□□ -0.14
Rpap2Q8VC34 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rpap2Q8VC34 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rpap2Q8VC34 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rpap2Q8VC34 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rpap2Q8VC34 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rpap2Q8VC34 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rpap2Q8VC34 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rpap2Q8VC34 Gm7553-201ENSMUST00000185805 1426 ntBASIC14.18□□□□□ -0.14
Rpap2Q8VC34 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rpap2Q8VC34 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Rpap2Q8VC34 Gm38157-201ENSMUST00000194178 1698 ntBASIC14.18□□□□□ -0.14
Rpap2Q8VC34 Gm10339-203ENSMUST00000225409 1671 ntBASIC14.18□□□□□ -0.14
Rpap2Q8VC34 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rpap2Q8VC34 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rpap2Q8VC34 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Rpap2Q8VC34 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rpap2Q8VC34 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rpap2Q8VC34 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC14.18□□□□□ -0.14
Rpap2Q8VC34 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Rpap2Q8VC34 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC14.18□□□□□ -0.14
Rpap2Q8VC34 Gm1335-201ENSMUST00000121653 386 ntBASIC14.18□□□□□ -0.14
Rpap2Q8VC34 Gm12363-201ENSMUST00000122250 668 ntBASIC14.18□□□□□ -0.14
Rpap2Q8VC34 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rpap2Q8VC34 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC14.18□□□□□ -0.14
Rpap2Q8VC34 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rpap2Q8VC34 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC14.18□□□□□ -0.14
Rpap2Q8VC34 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC14.18□□□□□ -0.14
Rpap2Q8VC34 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC14.18□□□□□ -0.14
Rpap2Q8VC34 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rpap2Q8VC34 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC14.18□□□□□ -0.14
Rpap2Q8VC34 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC14.18□□□□□ -0.14
Rpap2Q8VC34 Gm9299-201ENSMUST00000206392 1140 ntBASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms