Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim29Q8R2Q0 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim29Q8R2Q0 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Trim29Q8R2Q0 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim29Q8R2Q0 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim29Q8R2Q0 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC14.8□□□□□ -0.04
Trim29Q8R2Q0 Gm12490-201ENSMUST00000120255 560 ntBASIC14.8□□□□□ -0.04
Trim29Q8R2Q0 Gm12539-201ENSMUST00000121549 1098 ntBASIC14.8□□□□□ -0.04
Trim29Q8R2Q0 Gm12138-201ENSMUST00000122180 951 ntBASIC14.8□□□□□ -0.04
Trim29Q8R2Q0 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim29Q8R2Q0 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trim29Q8R2Q0 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC14.8□□□□□ -0.04
Trim29Q8R2Q0 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Trim29Q8R2Q0 Gm6244-201ENSMUST00000178732 841 ntBASIC14.8□□□□□ -0.04
Trim29Q8R2Q0 Gm45059-201ENSMUST00000205558 1077 ntBASIC14.8□□□□□ -0.04
Trim29Q8R2Q0 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim29Q8R2Q0 AC110817.1-201ENSMUST00000225706 605 ntBASIC14.8□□□□□ -0.04
Trim29Q8R2Q0 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim29Q8R2Q0 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim29Q8R2Q0 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim29Q8R2Q0 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Trim29Q8R2Q0 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim29Q8R2Q0 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim29Q8R2Q0 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim29Q8R2Q0 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim29Q8R2Q0 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim29Q8R2Q0 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim29Q8R2Q0 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim29Q8R2Q0 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Trim29Q8R2Q0 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Trim29Q8R2Q0 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Trim29Q8R2Q0 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trim29Q8R2Q0 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim29Q8R2Q0 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim29Q8R2Q0 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim29Q8R2Q0 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC14.79□□□□□ -0.04
Trim29Q8R2Q0 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trim29Q8R2Q0 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim29Q8R2Q0 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim29Q8R2Q0 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Trim29Q8R2Q0 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim29Q8R2Q0 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim29Q8R2Q0 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim29Q8R2Q0 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC14.79□□□□□ -0.04
Trim29Q8R2Q0 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim29Q8R2Q0 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC14.79□□□□□ -0.04
Trim29Q8R2Q0 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC14.79□□□□□ -0.04
Trim29Q8R2Q0 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC14.79□□□□□ -0.04
Trim29Q8R2Q0 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Trim29Q8R2Q0 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC14.79□□□□□ -0.04
Trim29Q8R2Q0 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim29Q8R2Q0 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim29Q8R2Q0 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim29Q8R2Q0 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim29Q8R2Q0 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Trim29Q8R2Q0 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim29Q8R2Q0 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim29Q8R2Q0 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim29Q8R2Q0 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim29Q8R2Q0 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Trim29Q8R2Q0 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim29Q8R2Q0 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim29Q8R2Q0 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim29Q8R2Q0 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim29Q8R2Q0 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim29Q8R2Q0 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Trim29Q8R2Q0 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim29Q8R2Q0 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trim29Q8R2Q0 Ssr1-203ENSMUST00000225246 1825 ntBASIC14.78□□□□□ -0.04
Trim29Q8R2Q0 CT025610.1-201ENSMUST00000224552 1786 ntBASIC14.78□□□□□ -0.04
Trim29Q8R2Q0 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC14.78□□□□□ -0.04
Trim29Q8R2Q0 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim29Q8R2Q0 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC14.78□□□□□ -0.04
Trim29Q8R2Q0 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
Trim29Q8R2Q0 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC14.78□□□□□ -0.04
Trim29Q8R2Q0 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trim29Q8R2Q0 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim29Q8R2Q0 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim29Q8R2Q0 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Trim29Q8R2Q0 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC14.78□□□□□ -0.04
Trim29Q8R2Q0 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trim29Q8R2Q0 Mup-ps23-201ENSMUST00000118063 630 ntBASIC14.78□□□□□ -0.04
Trim29Q8R2Q0 Gm10156-201ENSMUST00000122364 462 ntBASIC14.78□□□□□ -0.04
Trim29Q8R2Q0 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trim29Q8R2Q0 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC14.78□□□□□ -0.04
Trim29Q8R2Q0 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trim29Q8R2Q0 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
Trim29Q8R2Q0 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trim29Q8R2Q0 Gm28693-202ENSMUST00000190758 331 ntBASIC14.78□□□□□ -0.04
Trim29Q8R2Q0 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trim29Q8R2Q0 Ighv8-10-201ENSMUST00000199579 358 ntBASIC14.78□□□□□ -0.04
Trim29Q8R2Q0 Gm7653-201ENSMUST00000214567 508 ntBASIC14.78□□□□□ -0.04
Trim29Q8R2Q0 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim29Q8R2Q0 Gm8598-201ENSMUST00000221184 836 ntBASIC14.78□□□□□ -0.04
Trim29Q8R2Q0 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim29Q8R2Q0 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim29Q8R2Q0 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim29Q8R2Q0 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim29Q8R2Q0 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim29Q8R2Q0 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms