Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Chmp7Q8R1T1 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Chmp7Q8R1T1 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Chmp7Q8R1T1 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Chmp7Q8R1T1 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Chmp7Q8R1T1 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Chmp7Q8R1T1 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Chmp7Q8R1T1 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp7Q8R1T1 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp7Q8R1T1 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp7Q8R1T1 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp7Q8R1T1 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp7Q8R1T1 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Chmp7Q8R1T1 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC16.51■□□□□ 0.23
Chmp7Q8R1T1 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp7Q8R1T1 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp7Q8R1T1 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp7Q8R1T1 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp7Q8R1T1 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp7Q8R1T1 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp7Q8R1T1 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Chmp7Q8R1T1 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
Chmp7Q8R1T1 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp7Q8R1T1 Gm13736-201ENSMUST00000119272 253 ntBASIC16.51■□□□□ 0.23
Chmp7Q8R1T1 Gm14277-201ENSMUST00000121195 360 ntBASIC16.51■□□□□ 0.23
Chmp7Q8R1T1 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp7Q8R1T1 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC16.51■□□□□ 0.23
Chmp7Q8R1T1 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp7Q8R1T1 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp7Q8R1T1 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp7Q8R1T1 Gm8885-201ENSMUST00000189382 598 ntBASIC16.51■□□□□ 0.23
Chmp7Q8R1T1 Gm43138-201ENSMUST00000199123 708 ntBASIC16.51■□□□□ 0.23
Chmp7Q8R1T1 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp7Q8R1T1 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC16.51■□□□□ 0.23
Chmp7Q8R1T1 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC16.51■□□□□ 0.23
Chmp7Q8R1T1 AC113031.8-201ENSMUST00000227856 631 ntBASIC16.51■□□□□ 0.23
Chmp7Q8R1T1 AC108416.1-202ENSMUST00000228927 1201 ntBASIC16.51■□□□□ 0.23
Chmp7Q8R1T1 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp7Q8R1T1 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp7Q8R1T1 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp7Q8R1T1 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp7Q8R1T1 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp7Q8R1T1 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp7Q8R1T1 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp7Q8R1T1 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Chmp7Q8R1T1 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
Chmp7Q8R1T1 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp7Q8R1T1 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp7Q8R1T1 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp7Q8R1T1 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp7Q8R1T1 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp7Q8R1T1 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Chmp7Q8R1T1 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp7Q8R1T1 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp7Q8R1T1 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp7Q8R1T1 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp7Q8R1T1 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp7Q8R1T1 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp7Q8R1T1 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC16.5■□□□□ 0.23
Chmp7Q8R1T1 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Chmp7Q8R1T1 Gstp-ps-201ENSMUST00000195526 631 ntBASIC16.5■□□□□ 0.23
Chmp7Q8R1T1 Gm3786-201ENSMUST00000202659 378 ntBASIC16.5■□□□□ 0.23
Chmp7Q8R1T1 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp7Q8R1T1 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC16.5■□□□□ 0.23
Chmp7Q8R1T1 Gm8712-201ENSMUST00000221090 701 ntBASIC16.5■□□□□ 0.23
Chmp7Q8R1T1 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp7Q8R1T1 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp7Q8R1T1 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp7Q8R1T1 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp7Q8R1T1 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp7Q8R1T1 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp7Q8R1T1 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp7Q8R1T1 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp7Q8R1T1 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp7Q8R1T1 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Chmp7Q8R1T1 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC16.5■□□□□ 0.23
Chmp7Q8R1T1 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC16.5■□□□□ 0.23
Chmp7Q8R1T1 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp7Q8R1T1 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Chmp7Q8R1T1 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp7Q8R1T1 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp7Q8R1T1 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp7Q8R1T1 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp7Q8R1T1 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp7Q8R1T1 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Chmp7Q8R1T1 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp7Q8R1T1 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp7Q8R1T1 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC16.49■□□□□ 0.23
Chmp7Q8R1T1 Gm14028-201ENSMUST00000117434 479 ntBASIC16.49■□□□□ 0.23
Chmp7Q8R1T1 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Chmp7Q8R1T1 Gm9445-201ENSMUST00000207454 1285 ntBASIC16.49■□□□□ 0.23
Chmp7Q8R1T1 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC16.49■□□□□ 0.23
Chmp7Q8R1T1 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp7Q8R1T1 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Chmp7Q8R1T1 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp7Q8R1T1 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp7Q8R1T1 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp7Q8R1T1 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp7Q8R1T1 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Chmp7Q8R1T1 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms