Protein–RNA interactions for Protein: Q8K3Y3

Lin28a, Protein lin-28 homolog A, mousemouse

Known RBP Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin28aQ8K3Y3 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lin28aQ8K3Y3 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lin28aQ8K3Y3 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lin28aQ8K3Y3 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lin28aQ8K3Y3 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lin28aQ8K3Y3 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lin28aQ8K3Y3 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lin28aQ8K3Y3 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.11□□□□□ -0.47
Lin28aQ8K3Y3 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lin28aQ8K3Y3 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.11□□□□□ -0.47
Lin28aQ8K3Y3 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lin28aQ8K3Y3 Gm42853-201ENSMUST00000201273 1387 ntBASIC12.11□□□□□ -0.47
Lin28aQ8K3Y3 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
Lin28aQ8K3Y3 Mir874-201ENSMUST00000104769 76 ntBASIC12.11□□□□□ -0.47
Lin28aQ8K3Y3 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC12.11□□□□□ -0.47
Lin28aQ8K3Y3 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.11□□□□□ -0.47
Lin28aQ8K3Y3 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lin28aQ8K3Y3 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lin28aQ8K3Y3 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.11□□□□□ -0.47
Lin28aQ8K3Y3 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC12.11□□□□□ -0.47
Lin28aQ8K3Y3 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Lin28aQ8K3Y3 Gm38002-201ENSMUST00000193255 180 ntBASIC12.11□□□□□ -0.47
Lin28aQ8K3Y3 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.11□□□□□ -0.47
Lin28aQ8K3Y3 Gm19309-201ENSMUST00000218295 205 ntBASIC12.11□□□□□ -0.47
Lin28aQ8K3Y3 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.11□□□□□ -0.47
Lin28aQ8K3Y3 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.11□□□□□ -0.47
Lin28aQ8K3Y3 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lin28aQ8K3Y3 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Lin28aQ8K3Y3 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Lin28aQ8K3Y3 Gm8399-201ENSMUST00000082300 1117 ntBASIC12.11□□□□□ -0.47
Lin28aQ8K3Y3 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Lin28aQ8K3Y3 Olfr582-201ENSMUST00000098212 960 ntBASIC12.11□□□□□ -0.47
Lin28aQ8K3Y3 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lin28aQ8K3Y3 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lin28aQ8K3Y3 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Lin28aQ8K3Y3 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lin28aQ8K3Y3 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lin28aQ8K3Y3 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lin28aQ8K3Y3 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lin28aQ8K3Y3 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lin28aQ8K3Y3 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Lin28aQ8K3Y3 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.11□□□□□ -0.47
Lin28aQ8K3Y3 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lin28aQ8K3Y3 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lin28aQ8K3Y3 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lin28aQ8K3Y3 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lin28aQ8K3Y3 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lin28aQ8K3Y3 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lin28aQ8K3Y3 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Lin28aQ8K3Y3 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.1□□□□□ -0.47
Lin28aQ8K3Y3 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lin28aQ8K3Y3 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Lin28aQ8K3Y3 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lin28aQ8K3Y3 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lin28aQ8K3Y3 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lin28aQ8K3Y3 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lin28aQ8K3Y3 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lin28aQ8K3Y3 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lin28aQ8K3Y3 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.1□□□□□ -0.47
Lin28aQ8K3Y3 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Lin28aQ8K3Y3 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Lin28aQ8K3Y3 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Lin28aQ8K3Y3 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.1□□□□□ -0.47
Lin28aQ8K3Y3 Gm5940-201ENSMUST00000117582 1068 ntBASIC12.1□□□□□ -0.47
Lin28aQ8K3Y3 Gm11591-201ENSMUST00000120063 702 ntBASIC12.1□□□□□ -0.47
Lin28aQ8K3Y3 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.1□□□□□ -0.47
Lin28aQ8K3Y3 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Lin28aQ8K3Y3 Gm45331-201ENSMUST00000209868 554 ntBASIC12.1□□□□□ -0.47
Lin28aQ8K3Y3 AC159896.2-201ENSMUST00000214753 269 ntBASIC12.1□□□□□ -0.47
Lin28aQ8K3Y3 AC154319.1-201ENSMUST00000216330 312 ntBASIC12.1□□□□□ -0.47
Lin28aQ8K3Y3 AL589735.1-201ENSMUST00000224353 270 ntBASIC12.1□□□□□ -0.47
Lin28aQ8K3Y3 Gm7399-201ENSMUST00000032395 858 ntBASIC12.1□□□□□ -0.47
Lin28aQ8K3Y3 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lin28aQ8K3Y3 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Lin28aQ8K3Y3 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Lin28aQ8K3Y3 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Lin28aQ8K3Y3 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Lin28aQ8K3Y3 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Lin28aQ8K3Y3 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Lin28aQ8K3Y3 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.1□□□□□ -0.47
Lin28aQ8K3Y3 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.1□□□□□ -0.47
Lin28aQ8K3Y3 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.1□□□□□ -0.47
Lin28aQ8K3Y3 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Lin28aQ8K3Y3 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Lin28aQ8K3Y3 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lin28aQ8K3Y3 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lin28aQ8K3Y3 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Lin28aQ8K3Y3 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Lin28aQ8K3Y3 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Lin28aQ8K3Y3 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lin28aQ8K3Y3 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lin28aQ8K3Y3 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
Lin28aQ8K3Y3 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lin28aQ8K3Y3 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.1□□□□□ -0.47
Lin28aQ8K3Y3 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Lin28aQ8K3Y3 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lin28aQ8K3Y3 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lin28aQ8K3Y3 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
Lin28aQ8K3Y3 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Lin28aQ8K3Y3 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms