Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc87Q8CDL9 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc87Q8CDL9 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC13.76□□□□□ -0.21
Ccdc87Q8CDL9 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Ccdc87Q8CDL9 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc87Q8CDL9 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC13.76□□□□□ -0.21
Ccdc87Q8CDL9 Gm38037-201ENSMUST00000192600 1624 ntBASIC13.76□□□□□ -0.21
Ccdc87Q8CDL9 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc87Q8CDL9 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
Ccdc87Q8CDL9 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc87Q8CDL9 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc87Q8CDL9 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc87Q8CDL9 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Ccdc87Q8CDL9 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc87Q8CDL9 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc87Q8CDL9 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc87Q8CDL9 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC13.76□□□□□ -0.21
Ccdc87Q8CDL9 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC13.76□□□□□ -0.21
Ccdc87Q8CDL9 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Ccdc87Q8CDL9 Gm45668-201ENSMUST00000211271 493 ntBASIC13.76□□□□□ -0.21
Ccdc87Q8CDL9 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc87Q8CDL9 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Ccdc87Q8CDL9 Gm6180-201ENSMUST00000065243 498 ntBASIC13.76□□□□□ -0.21
Ccdc87Q8CDL9 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc87Q8CDL9 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc87Q8CDL9 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc87Q8CDL9 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc87Q8CDL9 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Ccdc87Q8CDL9 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc87Q8CDL9 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc87Q8CDL9 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Ccdc87Q8CDL9 Pck2-205ENSMUST00000226352 2784 ntBASIC13.76□□□□□ -0.21
Ccdc87Q8CDL9 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc87Q8CDL9 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Ccdc87Q8CDL9 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccdc87Q8CDL9 Adra1a-206ENSMUST00000225182 2337 ntBASIC13.75□□□□□ -0.21
Ccdc87Q8CDL9 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC13.75□□□□□ -0.21
Ccdc87Q8CDL9 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccdc87Q8CDL9 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Ccdc87Q8CDL9 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccdc87Q8CDL9 AC159195.1-201ENSMUST00000225867 2086 ntBASIC13.75□□□□□ -0.21
Ccdc87Q8CDL9 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
Ccdc87Q8CDL9 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Ccdc87Q8CDL9 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC13.75□□□□□ -0.21
Ccdc87Q8CDL9 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccdc87Q8CDL9 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC13.75□□□□□ -0.21
Ccdc87Q8CDL9 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccdc87Q8CDL9 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC13.75□□□□□ -0.21
Ccdc87Q8CDL9 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccdc87Q8CDL9 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccdc87Q8CDL9 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Ccdc87Q8CDL9 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccdc87Q8CDL9 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Ccdc87Q8CDL9 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccdc87Q8CDL9 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC13.75□□□□□ -0.21
Ccdc87Q8CDL9 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccdc87Q8CDL9 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
Ccdc87Q8CDL9 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc87Q8CDL9 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc87Q8CDL9 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc87Q8CDL9 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc87Q8CDL9 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Ccdc87Q8CDL9 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc87Q8CDL9 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc87Q8CDL9 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc87Q8CDL9 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc87Q8CDL9 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC13.74□□□□□ -0.21
Ccdc87Q8CDL9 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc87Q8CDL9 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Ccdc87Q8CDL9 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC13.74□□□□□ -0.21
Ccdc87Q8CDL9 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc87Q8CDL9 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc87Q8CDL9 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc87Q8CDL9 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc87Q8CDL9 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Ccdc87Q8CDL9 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC13.74□□□□□ -0.21
Ccdc87Q8CDL9 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC13.74□□□□□ -0.21
Ccdc87Q8CDL9 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC13.74□□□□□ -0.21
Ccdc87Q8CDL9 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC13.74□□□□□ -0.21
Ccdc87Q8CDL9 AC155258.1-201ENSMUST00000219303 253 ntBASIC13.74□□□□□ -0.21
Ccdc87Q8CDL9 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc87Q8CDL9 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc87Q8CDL9 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc87Q8CDL9 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc87Q8CDL9 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC13.74□□□□□ -0.21
Ccdc87Q8CDL9 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc87Q8CDL9 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc87Q8CDL9 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc87Q8CDL9 Gm42829-201ENSMUST00000198417 2585 ntBASIC13.74□□□□□ -0.21
Ccdc87Q8CDL9 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Ccdc87Q8CDL9 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc87Q8CDL9 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc87Q8CDL9 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc87Q8CDL9 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc87Q8CDL9 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc87Q8CDL9 Gm9115-201ENSMUST00000120192 1348 ntBASIC13.73□□□□□ -0.21
Ccdc87Q8CDL9 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc87Q8CDL9 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc87Q8CDL9 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc87Q8CDL9 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms