Protein–RNA interactions for Protein: Q8CCE9

E4f1, Transcription factor E4F1, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E4f1Q8CCE9 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC15.24■□□□□ 0.03
E4f1Q8CCE9 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
E4f1Q8CCE9 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
E4f1Q8CCE9 Gm18935-201ENSMUST00000212692 664 ntBASIC15.24■□□□□ 0.03
E4f1Q8CCE9 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC15.24■□□□□ 0.03
E4f1Q8CCE9 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
E4f1Q8CCE9 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
E4f1Q8CCE9 Gm16372-201ENSMUST00000073088 450 ntBASIC15.24■□□□□ 0.03
E4f1Q8CCE9 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
E4f1Q8CCE9 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
E4f1Q8CCE9 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
E4f1Q8CCE9 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC15.24■□□□□ 0.03
E4f1Q8CCE9 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
E4f1Q8CCE9 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
E4f1Q8CCE9 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
E4f1Q8CCE9 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
E4f1Q8CCE9 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
E4f1Q8CCE9 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
E4f1Q8CCE9 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
E4f1Q8CCE9 Gm45684-201ENSMUST00000210244 1571 ntBASIC15.24■□□□□ 0.03
E4f1Q8CCE9 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
E4f1Q8CCE9 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
E4f1Q8CCE9 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
E4f1Q8CCE9 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
E4f1Q8CCE9 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
E4f1Q8CCE9 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
E4f1Q8CCE9 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
E4f1Q8CCE9 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
E4f1Q8CCE9 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
E4f1Q8CCE9 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
E4f1Q8CCE9 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC15.23■□□□□ 0.03
E4f1Q8CCE9 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC15.23■□□□□ 0.03
E4f1Q8CCE9 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC15.23■□□□□ 0.03
E4f1Q8CCE9 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC15.23■□□□□ 0.03
E4f1Q8CCE9 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC15.23■□□□□ 0.03
E4f1Q8CCE9 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC15.23■□□□□ 0.03
E4f1Q8CCE9 Gm7029-201ENSMUST00000173226 450 ntBASIC15.23■□□□□ 0.03
E4f1Q8CCE9 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC15.23■□□□□ 0.03
E4f1Q8CCE9 Gm5850-201ENSMUST00000192923 1206 ntBASIC15.23■□□□□ 0.03
E4f1Q8CCE9 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC15.23■□□□□ 0.03
E4f1Q8CCE9 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC15.23■□□□□ 0.03
E4f1Q8CCE9 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC15.23■□□□□ 0.03
E4f1Q8CCE9 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC15.23■□□□□ 0.03
E4f1Q8CCE9 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
E4f1Q8CCE9 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
E4f1Q8CCE9 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
E4f1Q8CCE9 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
E4f1Q8CCE9 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC15.23■□□□□ 0.03
E4f1Q8CCE9 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
E4f1Q8CCE9 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
E4f1Q8CCE9 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
E4f1Q8CCE9 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
E4f1Q8CCE9 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
E4f1Q8CCE9 CT009757.3-201ENSMUST00000223367 2320 ntBASIC15.23■□□□□ 0.03
E4f1Q8CCE9 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
E4f1Q8CCE9 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
E4f1Q8CCE9 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
E4f1Q8CCE9 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
E4f1Q8CCE9 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
E4f1Q8CCE9 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
E4f1Q8CCE9 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
E4f1Q8CCE9 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
E4f1Q8CCE9 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC15.22■□□□□ 0.03
E4f1Q8CCE9 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
E4f1Q8CCE9 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
E4f1Q8CCE9 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
E4f1Q8CCE9 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
E4f1Q8CCE9 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
E4f1Q8CCE9 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
E4f1Q8CCE9 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
E4f1Q8CCE9 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
E4f1Q8CCE9 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC15.22■□□□□ 0.03
E4f1Q8CCE9 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC15.22■□□□□ 0.03
E4f1Q8CCE9 Gm11793-201ENSMUST00000120433 981 ntBASIC15.22■□□□□ 0.03
E4f1Q8CCE9 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
E4f1Q8CCE9 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC15.22■□□□□ 0.03
E4f1Q8CCE9 Gm44364-201ENSMUST00000198368 141 ntBASIC15.22■□□□□ 0.03
E4f1Q8CCE9 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
E4f1Q8CCE9 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC15.22■□□□□ 0.03
E4f1Q8CCE9 AC173210.1-201ENSMUST00000222341 1131 ntBASIC15.22■□□□□ 0.03
E4f1Q8CCE9 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
E4f1Q8CCE9 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
E4f1Q8CCE9 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC15.22■□□□□ 0.03
E4f1Q8CCE9 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
E4f1Q8CCE9 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
E4f1Q8CCE9 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
E4f1Q8CCE9 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
E4f1Q8CCE9 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
E4f1Q8CCE9 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
E4f1Q8CCE9 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
E4f1Q8CCE9 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
E4f1Q8CCE9 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
E4f1Q8CCE9 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
E4f1Q8CCE9 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
E4f1Q8CCE9 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
E4f1Q8CCE9 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC15.22■□□□□ 0.03
E4f1Q8CCE9 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
E4f1Q8CCE9 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC15.21■□□□□ 0.03
E4f1Q8CCE9 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
E4f1Q8CCE9 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms