Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Vps53Q8CCB4 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Vps53Q8CCB4 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps53Q8CCB4 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps53Q8CCB4 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Vps53Q8CCB4 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC15.1■□□□□ 0.01
Vps53Q8CCB4 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps53Q8CCB4 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps53Q8CCB4 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC15.1■□□□□ 0.01
Vps53Q8CCB4 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Vps53Q8CCB4 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps53Q8CCB4 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps53Q8CCB4 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
Vps53Q8CCB4 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
Vps53Q8CCB4 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC15.09■□□□□ 0.01
Vps53Q8CCB4 Gm43364-201ENSMUST00000196046 3274 ntBASIC15.09■□□□□ 0.01
Vps53Q8CCB4 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC15.09■□□□□ 0.01
Vps53Q8CCB4 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Vps53Q8CCB4 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Vps53Q8CCB4 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC15.09■□□□□ 0.01
Vps53Q8CCB4 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Vps53Q8CCB4 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC15.09■□□□□ 0.01
Vps53Q8CCB4 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC15.09■□□□□ 0.01
Vps53Q8CCB4 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps53Q8CCB4 Gm8810-201ENSMUST00000172895 754 ntBASIC15.09■□□□□ 0.01
Vps53Q8CCB4 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC15.09■□□□□ 0.01
Vps53Q8CCB4 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC15.09■□□□□ 0.01
Vps53Q8CCB4 AC154276.1-201ENSMUST00000228874 1299 ntBASIC15.09■□□□□ 0.01
Vps53Q8CCB4 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC15.09■□□□□ 0.01
Vps53Q8CCB4 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps53Q8CCB4 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps53Q8CCB4 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Vps53Q8CCB4 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Vps53Q8CCB4 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Vps53Q8CCB4 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps53Q8CCB4 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Vps53Q8CCB4 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps53Q8CCB4 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
Vps53Q8CCB4 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps53Q8CCB4 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps53Q8CCB4 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC15.09■□□□□ 0.01
Vps53Q8CCB4 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Vps53Q8CCB4 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC15.09■□□□□ 0.01
Vps53Q8CCB4 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Vps53Q8CCB4 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Vps53Q8CCB4 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Vps53Q8CCB4 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Vps53Q8CCB4 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Vps53Q8CCB4 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Vps53Q8CCB4 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Vps53Q8CCB4 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Vps53Q8CCB4 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Vps53Q8CCB4 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Vps53Q8CCB4 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Vps53Q8CCB4 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
Vps53Q8CCB4 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC15.08■□□□□ 0
Vps53Q8CCB4 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Vps53Q8CCB4 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC15.08■□□□□ 0
Vps53Q8CCB4 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC15.08■□□□□ 0
Vps53Q8CCB4 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC15.08■□□□□ 0
Vps53Q8CCB4 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC15.08■□□□□ 0
Vps53Q8CCB4 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC15.08■□□□□ 0
Vps53Q8CCB4 Gm27331-201ENSMUST00000183705 60 ntBASIC15.08■□□□□ 0
Vps53Q8CCB4 CT009713.10-202ENSMUST00000225734 696 ntBASIC15.08■□□□□ 0
Vps53Q8CCB4 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Vps53Q8CCB4 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
Vps53Q8CCB4 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Vps53Q8CCB4 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Vps53Q8CCB4 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vps53Q8CCB4 Gm15459-201ENSMUST00000117405 1941 ntBASIC15.07■□□□□ 0
Vps53Q8CCB4 Gm8355-201ENSMUST00000177767 1941 ntBASIC15.07■□□□□ 0
Vps53Q8CCB4 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Vps53Q8CCB4 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vps53Q8CCB4 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vps53Q8CCB4 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Vps53Q8CCB4 Gm5989-201ENSMUST00000096092 2077 ntBASIC15.07■□□□□ 0
Vps53Q8CCB4 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vps53Q8CCB4 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vps53Q8CCB4 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Vps53Q8CCB4 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vps53Q8CCB4 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Vps53Q8CCB4 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vps53Q8CCB4 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Vps53Q8CCB4 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC15.07■□□□□ 0
Vps53Q8CCB4 Gm8213-201ENSMUST00000118191 441 ntBASIC15.07■□□□□ 0
Vps53Q8CCB4 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC15.07■□□□□ 0
Vps53Q8CCB4 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC15.07■□□□□ 0
Vps53Q8CCB4 Gm19184-201ENSMUST00000196798 928 ntBASIC15.07■□□□□ 0
Vps53Q8CCB4 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC15.07■□□□□ 0
Vps53Q8CCB4 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC15.07■□□□□ 0
Vps53Q8CCB4 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
Vps53Q8CCB4 Gm29705-201ENSMUST00000212598 474 ntBASIC15.07■□□□□ 0
Vps53Q8CCB4 Gm8598-201ENSMUST00000221184 836 ntBASIC15.07■□□□□ 0
Vps53Q8CCB4 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vps53Q8CCB4 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vps53Q8CCB4 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vps53Q8CCB4 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC15.07■□□□□ 0
Vps53Q8CCB4 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vps53Q8CCB4 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Vps53Q8CCB4 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms