Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shisa4Q8CA71 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC14.98□□□□□ -0.01
Shisa4Q8CA71 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shisa4Q8CA71 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Shisa4Q8CA71 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Shisa4Q8CA71 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Shisa4Q8CA71 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shisa4Q8CA71 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shisa4Q8CA71 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shisa4Q8CA71 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shisa4Q8CA71 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shisa4Q8CA71 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Shisa4Q8CA71 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Shisa4Q8CA71 Gm3287-205ENSMUST00000228893 1332 ntBASIC14.97□□□□□ -0.01
Shisa4Q8CA71 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Shisa4Q8CA71 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC14.97□□□□□ -0.01
Shisa4Q8CA71 Gm43823-201ENSMUST00000197391 1808 ntBASIC14.97□□□□□ -0.01
Shisa4Q8CA71 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Shisa4Q8CA71 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Shisa4Q8CA71 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC14.97□□□□□ -0.01
Shisa4Q8CA71 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Shisa4Q8CA71 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Shisa4Q8CA71 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Shisa4Q8CA71 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Shisa4Q8CA71 Gm5781-201ENSMUST00000219792 443 ntBASIC14.97□□□□□ -0.01
Shisa4Q8CA71 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Shisa4Q8CA71 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shisa4Q8CA71 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shisa4Q8CA71 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shisa4Q8CA71 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shisa4Q8CA71 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Shisa4Q8CA71 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shisa4Q8CA71 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shisa4Q8CA71 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC14.97□□□□□ -0.01
Shisa4Q8CA71 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Shisa4Q8CA71 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shisa4Q8CA71 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Shisa4Q8CA71 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Shisa4Q8CA71 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Shisa4Q8CA71 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Shisa4Q8CA71 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Shisa4Q8CA71 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Shisa4Q8CA71 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
Shisa4Q8CA71 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Shisa4Q8CA71 Gm13875-201ENSMUST00000120162 282 ntBASIC14.96□□□□□ -0.01
Shisa4Q8CA71 Gm15703-201ENSMUST00000120250 880 ntBASIC14.96□□□□□ -0.01
Shisa4Q8CA71 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Shisa4Q8CA71 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Shisa4Q8CA71 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Shisa4Q8CA71 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC14.96□□□□□ -0.01
Shisa4Q8CA71 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC14.96□□□□□ -0.01
Shisa4Q8CA71 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC14.96□□□□□ -0.01
Shisa4Q8CA71 Olfr284-202ENSMUST00000206647 966 ntBASIC14.96□□□□□ -0.01
Shisa4Q8CA71 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Shisa4Q8CA71 Gm9176-201ENSMUST00000219955 1120 ntBASIC14.96□□□□□ -0.01
Shisa4Q8CA71 Gm8227-201ENSMUST00000223306 571 ntBASIC14.96□□□□□ -0.01
Shisa4Q8CA71 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Shisa4Q8CA71 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Shisa4Q8CA71 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Shisa4Q8CA71 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Shisa4Q8CA71 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Shisa4Q8CA71 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC14.96□□□□□ -0.01
Shisa4Q8CA71 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Shisa4Q8CA71 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Shisa4Q8CA71 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Shisa4Q8CA71 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Shisa4Q8CA71 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Shisa4Q8CA71 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Shisa4Q8CA71 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC14.96□□□□□ -0.01
Shisa4Q8CA71 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Shisa4Q8CA71 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Shisa4Q8CA71 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Shisa4Q8CA71 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
Shisa4Q8CA71 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
Shisa4Q8CA71 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
Shisa4Q8CA71 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Shisa4Q8CA71 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Shisa4Q8CA71 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Shisa4Q8CA71 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Shisa4Q8CA71 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Shisa4Q8CA71 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Shisa4Q8CA71 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Shisa4Q8CA71 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Shisa4Q8CA71 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Shisa4Q8CA71 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Shisa4Q8CA71 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Shisa4Q8CA71 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC14.95□□□□□ -0.02
Shisa4Q8CA71 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC14.95□□□□□ -0.02
Shisa4Q8CA71 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Shisa4Q8CA71 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Shisa4Q8CA71 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Shisa4Q8CA71 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Shisa4Q8CA71 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Shisa4Q8CA71 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Shisa4Q8CA71 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Shisa4Q8CA71 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Shisa4Q8CA71 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Shisa4Q8CA71 Gm20633-201ENSMUST00000176742 2831 ntBASIC14.95□□□□□ -0.02
Shisa4Q8CA71 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC14.95□□□□□ -0.02
Shisa4Q8CA71 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms