Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc60Q8C4J0 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Ccdc60Q8C4J0 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc60Q8C4J0 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc60Q8C4J0 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc60Q8C4J0 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc60Q8C4J0 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc60Q8C4J0 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC16.51■□□□□ 0.23
Ccdc60Q8C4J0 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc60Q8C4J0 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc60Q8C4J0 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc60Q8C4J0 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc60Q8C4J0 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc60Q8C4J0 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc60Q8C4J0 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc60Q8C4J0 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Ccdc60Q8C4J0 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc60Q8C4J0 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc60Q8C4J0 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC16.5■□□□□ 0.23
Ccdc60Q8C4J0 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC16.5■□□□□ 0.23
Ccdc60Q8C4J0 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC16.5■□□□□ 0.23
Ccdc60Q8C4J0 Gm4768-201ENSMUST00000206199 686 ntBASIC16.5■□□□□ 0.23
Ccdc60Q8C4J0 Gm32025-201ENSMUST00000217960 307 ntBASIC16.5■□□□□ 0.23
Ccdc60Q8C4J0 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC16.5■□□□□ 0.23
Ccdc60Q8C4J0 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc60Q8C4J0 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc60Q8C4J0 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc60Q8C4J0 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc60Q8C4J0 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc60Q8C4J0 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc60Q8C4J0 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
Ccdc60Q8C4J0 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc60Q8C4J0 Dctn4-202ENSMUST00000223590 1530 ntBASIC16.5■□□□□ 0.23
Ccdc60Q8C4J0 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc60Q8C4J0 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc60Q8C4J0 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc60Q8C4J0 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc60Q8C4J0 Gm5620-201ENSMUST00000077991 1348 ntBASIC16.49■□□□□ 0.23
Ccdc60Q8C4J0 Gm45643-201ENSMUST00000211364 1484 ntBASIC16.49■□□□□ 0.23
Ccdc60Q8C4J0 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc60Q8C4J0 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc60Q8C4J0 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc60Q8C4J0 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC16.49■□□□□ 0.23
Ccdc60Q8C4J0 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Ccdc60Q8C4J0 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc60Q8C4J0 Gm12291-201ENSMUST00000121627 311 ntBASIC16.49■□□□□ 0.23
Ccdc60Q8C4J0 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC16.49■□□□□ 0.23
Ccdc60Q8C4J0 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC16.49■□□□□ 0.23
Ccdc60Q8C4J0 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Ccdc60Q8C4J0 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc60Q8C4J0 Gm8565-201ENSMUST00000183259 1014 ntBASIC16.49■□□□□ 0.23
Ccdc60Q8C4J0 Mir7085-201ENSMUST00000184353 66 ntBASIC16.49■□□□□ 0.23
Ccdc60Q8C4J0 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc60Q8C4J0 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc60Q8C4J0 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc60Q8C4J0 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc60Q8C4J0 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc60Q8C4J0 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC16.49■□□□□ 0.23
Ccdc60Q8C4J0 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc60Q8C4J0 Ssr1-203ENSMUST00000225246 1825 ntBASIC16.49■□□□□ 0.23
Ccdc60Q8C4J0 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
Ccdc60Q8C4J0 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc60Q8C4J0 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc60Q8C4J0 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc60Q8C4J0 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc60Q8C4J0 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc60Q8C4J0 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc60Q8C4J0 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc60Q8C4J0 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc60Q8C4J0 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc60Q8C4J0 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc60Q8C4J0 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Ccdc60Q8C4J0 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC16.48■□□□□ 0.23
Ccdc60Q8C4J0 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC16.48■□□□□ 0.23
Ccdc60Q8C4J0 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc60Q8C4J0 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc60Q8C4J0 Gm18062-201ENSMUST00000208020 547 ntBASIC16.48■□□□□ 0.23
Ccdc60Q8C4J0 Gm18055-201ENSMUST00000208254 547 ntBASIC16.48■□□□□ 0.23
Ccdc60Q8C4J0 AC126253.1-201ENSMUST00000227974 824 ntBASIC16.48■□□□□ 0.23
Ccdc60Q8C4J0 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc60Q8C4J0 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc60Q8C4J0 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc60Q8C4J0 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Ccdc60Q8C4J0 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc60Q8C4J0 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Ccdc60Q8C4J0 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Ccdc60Q8C4J0 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc60Q8C4J0 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc60Q8C4J0 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc60Q8C4J0 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc60Q8C4J0 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc60Q8C4J0 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc60Q8C4J0 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc60Q8C4J0 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc60Q8C4J0 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc60Q8C4J0 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC16.47■□□□□ 0.23
Ccdc60Q8C4J0 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc60Q8C4J0 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Ccdc60Q8C4J0 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc60Q8C4J0 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms