Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Ighv2-1-201ENSMUST00000170946 353 ntBASIC10.66□□□□□ -0.7
Smg1Q8BKX6 Gm7959-201ENSMUST00000221823 1078 ntBASIC10.66□□□□□ -0.7
Smg1Q8BKX6 Ap3s1-202ENSMUST00000224622 978 ntBASIC10.66□□□□□ -0.7
Smg1Q8BKX6 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smg1Q8BKX6 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC10.66□□□□□ -0.7
Smg1Q8BKX6 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smg1Q8BKX6 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smg1Q8BKX6 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Smg1Q8BKX6 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Smg1Q8BKX6 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smg1Q8BKX6 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smg1Q8BKX6 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smg1Q8BKX6 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smg1Q8BKX6 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Smg1Q8BKX6 Gm38355-201ENSMUST00000192514 1570 ntBASIC10.66□□□□□ -0.7
Smg1Q8BKX6 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Smg1Q8BKX6 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC10.66□□□□□ -0.7
Smg1Q8BKX6 Gm14034-201ENSMUST00000120147 551 ntBASIC10.66□□□□□ -0.7
Smg1Q8BKX6 AC153505.1-201ENSMUST00000218819 1071 ntBASIC10.66□□□□□ -0.7
Smg1Q8BKX6 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC10.66□□□□□ -0.7
Smg1Q8BKX6 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smg1Q8BKX6 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
Smg1Q8BKX6 Mirlet7i-201ENSMUST00000083472 85 ntBASIC10.66□□□□□ -0.7
Smg1Q8BKX6 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smg1Q8BKX6 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smg1Q8BKX6 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smg1Q8BKX6 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smg1Q8BKX6 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Smg1Q8BKX6 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Smg1Q8BKX6 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smg1Q8BKX6 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smg1Q8BKX6 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smg1Q8BKX6 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smg1Q8BKX6 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smg1Q8BKX6 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Smg1Q8BKX6 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Smg1Q8BKX6 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Smg1Q8BKX6 Mup-ps26-201ENSMUST00000121751 202 ntBASIC10.65□□□□□ -0.7
Smg1Q8BKX6 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC10.65□□□□□ -0.7
Smg1Q8BKX6 Gm5852-201ENSMUST00000194119 1021 ntBASIC10.65□□□□□ -0.7
Smg1Q8BKX6 Gm5542-201ENSMUST00000195485 1089 ntBASIC10.65□□□□□ -0.7
Smg1Q8BKX6 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC10.65□□□□□ -0.7
Smg1Q8BKX6 Gm7395-201ENSMUST00000216059 1045 ntBASIC10.65□□□□□ -0.7
Smg1Q8BKX6 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC10.65□□□□□ -0.7
Smg1Q8BKX6 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Smg1Q8BKX6 Gm21998-201ENSMUST00000117552 1308 ntBASIC10.65□□□□□ -0.7
Smg1Q8BKX6 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Smg1Q8BKX6 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Smg1Q8BKX6 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Smg1Q8BKX6 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Smg1Q8BKX6 Gm15784-201ENSMUST00000120260 1462 ntBASIC10.65□□□□□ -0.7
Smg1Q8BKX6 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Smg1Q8BKX6 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Smg1Q8BKX6 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Smg1Q8BKX6 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Smg1Q8BKX6 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Smg1Q8BKX6 Gm45398-201ENSMUST00000210561 165 ntBASIC10.65□□□□□ -0.7
Smg1Q8BKX6 Gm17827-201ENSMUST00000211825 742 ntBASIC10.65□□□□□ -0.7
Smg1Q8BKX6 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Smg1Q8BKX6 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Smg1Q8BKX6 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC10.65□□□□□ -0.7
Smg1Q8BKX6 Gm8018-201ENSMUST00000173536 789 ntBASIC10.65□□□□□ -0.7
Smg1Q8BKX6 Gm37299-201ENSMUST00000193951 826 ntBASIC10.65□□□□□ -0.7
Smg1Q8BKX6 Gm44980-201ENSMUST00000205826 314 ntBASIC10.65□□□□□ -0.7
Smg1Q8BKX6 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Smg1Q8BKX6 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Smg1Q8BKX6 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Smg1Q8BKX6 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.71
Smg1Q8BKX6 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Smg1Q8BKX6 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Smg1Q8BKX6 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Smg1Q8BKX6 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Smg1Q8BKX6 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Smg1Q8BKX6 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC10.64□□□□□ -0.71
Smg1Q8BKX6 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Smg1Q8BKX6 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC10.64□□□□□ -0.71
Smg1Q8BKX6 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Smg1Q8BKX6 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC10.64□□□□□ -0.71
Smg1Q8BKX6 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Smg1Q8BKX6 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Smg1Q8BKX6 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Smg1Q8BKX6 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Smg1Q8BKX6 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Smg1Q8BKX6 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Smg1Q8BKX6 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Smg1Q8BKX6 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC10.64□□□□□ -0.71
Smg1Q8BKX6 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Smg1Q8BKX6 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Smg1Q8BKX6 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Smg1Q8BKX6 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Smg1Q8BKX6 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC10.64□□□□□ -0.71
Smg1Q8BKX6 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Smg1Q8BKX6 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC10.64□□□□□ -0.71
Smg1Q8BKX6 Gm42682-201ENSMUST00000198349 1265 ntBASIC10.64□□□□□ -0.71
Smg1Q8BKX6 AI839979-201ENSMUST00000200738 654 ntTSL 2 BASIC10.64□□□□□ -0.71
Smg1Q8BKX6 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC10.64□□□□□ -0.71
Smg1Q8BKX6 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Smg1Q8BKX6 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Smg1Q8BKX6 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Smg1Q8BKX6 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC10.64□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms