Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trnp1Q80ZI1 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Trnp1Q80ZI1 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trnp1Q80ZI1 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trnp1Q80ZI1 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC14.47□□□□□ -0.09
Trnp1Q80ZI1 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trnp1Q80ZI1 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trnp1Q80ZI1 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trnp1Q80ZI1 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trnp1Q80ZI1 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trnp1Q80ZI1 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trnp1Q80ZI1 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Trnp1Q80ZI1 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trnp1Q80ZI1 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC14.47□□□□□ -0.09
Trnp1Q80ZI1 Mir680-2-201ENSMUST00000102163 110 ntBASIC14.47□□□□□ -0.09
Trnp1Q80ZI1 Gm23251-201ENSMUST00000103773 110 ntBASIC14.47□□□□□ -0.09
Trnp1Q80ZI1 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trnp1Q80ZI1 Gm13888-201ENSMUST00000119148 422 ntBASIC14.47□□□□□ -0.09
Trnp1Q80ZI1 Gm12029-201ENSMUST00000120073 832 ntBASIC14.47□□□□□ -0.09
Trnp1Q80ZI1 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC14.47□□□□□ -0.09
Trnp1Q80ZI1 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC14.47□□□□□ -0.09
Trnp1Q80ZI1 Gm17391-201ENSMUST00000171036 126 ntBASIC14.47□□□□□ -0.09
Trnp1Q80ZI1 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC14.47□□□□□ -0.09
Trnp1Q80ZI1 Gm8494-201ENSMUST00000178171 1233 ntBASIC14.47□□□□□ -0.09
Trnp1Q80ZI1 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC14.47□□□□□ -0.09
Trnp1Q80ZI1 Gm9540-201ENSMUST00000188230 478 ntBASIC14.47□□□□□ -0.09
Trnp1Q80ZI1 Gm43916-201ENSMUST00000205062 967 ntBASIC14.47□□□□□ -0.09
Trnp1Q80ZI1 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Trnp1Q80ZI1 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC14.47□□□□□ -0.09
Trnp1Q80ZI1 AC163667.3-201ENSMUST00000225774 222 ntBASIC14.47□□□□□ -0.09
Trnp1Q80ZI1 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trnp1Q80ZI1 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trnp1Q80ZI1 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trnp1Q80ZI1 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trnp1Q80ZI1 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trnp1Q80ZI1 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trnp1Q80ZI1 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trnp1Q80ZI1 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trnp1Q80ZI1 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trnp1Q80ZI1 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trnp1Q80ZI1 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trnp1Q80ZI1 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.47□□□□□ -0.09
Trnp1Q80ZI1 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trnp1Q80ZI1 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trnp1Q80ZI1 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trnp1Q80ZI1 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trnp1Q80ZI1 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trnp1Q80ZI1 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trnp1Q80ZI1 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.47□□□□□ -0.09
Trnp1Q80ZI1 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trnp1Q80ZI1 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Trnp1Q80ZI1 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trnp1Q80ZI1 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trnp1Q80ZI1 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trnp1Q80ZI1 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trnp1Q80ZI1 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.46□□□□□ -0.09
Trnp1Q80ZI1 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trnp1Q80ZI1 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trnp1Q80ZI1 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC14.46□□□□□ -0.09
Trnp1Q80ZI1 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trnp1Q80ZI1 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC14.46□□□□□ -0.09
Trnp1Q80ZI1 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trnp1Q80ZI1 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trnp1Q80ZI1 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trnp1Q80ZI1 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC14.46□□□□□ -0.09
Trnp1Q80ZI1 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trnp1Q80ZI1 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC14.46□□□□□ -0.09
Trnp1Q80ZI1 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trnp1Q80ZI1 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trnp1Q80ZI1 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
Trnp1Q80ZI1 Gm7600-201ENSMUST00000209657 785 ntBASIC14.46□□□□□ -0.09
Trnp1Q80ZI1 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trnp1Q80ZI1 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trnp1Q80ZI1 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trnp1Q80ZI1 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trnp1Q80ZI1 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trnp1Q80ZI1 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trnp1Q80ZI1 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trnp1Q80ZI1 Gm9025-201ENSMUST00000122415 1575 ntBASIC14.46□□□□□ -0.09
Trnp1Q80ZI1 AC113060.1-201ENSMUST00000225689 1573 ntBASIC14.46□□□□□ -0.09
Trnp1Q80ZI1 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trnp1Q80ZI1 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.1
Trnp1Q80ZI1 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trnp1Q80ZI1 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trnp1Q80ZI1 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trnp1Q80ZI1 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trnp1Q80ZI1 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Trnp1Q80ZI1 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trnp1Q80ZI1 Gm12626-201ENSMUST00000117339 1983 ntBASIC14.45□□□□□ -0.1
Trnp1Q80ZI1 Gm12623-201ENSMUST00000119849 1983 ntBASIC14.45□□□□□ -0.1
Trnp1Q80ZI1 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trnp1Q80ZI1 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Trnp1Q80ZI1 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trnp1Q80ZI1 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trnp1Q80ZI1 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trnp1Q80ZI1 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trnp1Q80ZI1 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trnp1Q80ZI1 Selenot-ps-201ENSMUST00000119098 593 ntBASIC14.45□□□□□ -0.1
Trnp1Q80ZI1 Gm5863-201ENSMUST00000121760 1008 ntBASIC14.45□□□□□ -0.1
Trnp1Q80ZI1 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms