Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC14.99□□□□□ -0.01
Nup98Q6PFD9 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC14.99□□□□□ -0.01
Nup98Q6PFD9 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC14.99□□□□□ -0.01
Nup98Q6PFD9 Gm27552-201ENSMUST00000183351 62 ntBASIC14.99□□□□□ -0.01
Nup98Q6PFD9 Gm27844-201ENSMUST00000183613 62 ntBASIC14.99□□□□□ -0.01
Nup98Q6PFD9 Mir6979-201ENSMUST00000183927 56 ntBASIC14.99□□□□□ -0.01
Nup98Q6PFD9 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC14.99□□□□□ -0.01
Nup98Q6PFD9 Gm6198-201ENSMUST00000191337 2929 ntBASIC14.99□□□□□ -0.01
Nup98Q6PFD9 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nup98Q6PFD9 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC14.99□□□□□ -0.01
Nup98Q6PFD9 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nup98Q6PFD9 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Nup98Q6PFD9 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nup98Q6PFD9 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nup98Q6PFD9 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nup98Q6PFD9 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nup98Q6PFD9 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nup98Q6PFD9 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nup98Q6PFD9 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Nup98Q6PFD9 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nup98Q6PFD9 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC14.99□□□□□ -0.01
Nup98Q6PFD9 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Nup98Q6PFD9 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nup98Q6PFD9 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nup98Q6PFD9 Gm12286-201ENSMUST00000119246 1002 ntBASIC14.99□□□□□ -0.01
Nup98Q6PFD9 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC14.99□□□□□ -0.01
Nup98Q6PFD9 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC14.99□□□□□ -0.01
Nup98Q6PFD9 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC14.99□□□□□ -0.01
Nup98Q6PFD9 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC14.99□□□□□ -0.01
Nup98Q6PFD9 Gm9230-201ENSMUST00000188228 532 ntBASIC14.99□□□□□ -0.01
Nup98Q6PFD9 Gm7848-201ENSMUST00000210739 718 ntBASIC14.99□□□□□ -0.01
Nup98Q6PFD9 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC14.99□□□□□ -0.01
Nup98Q6PFD9 Dhrs4-202ENSMUST00000226168 828 ntBASIC14.99□□□□□ -0.01
Nup98Q6PFD9 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nup98Q6PFD9 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Nup98Q6PFD9 Gm13812-201ENSMUST00000118061 1347 ntBASIC14.98□□□□□ -0.01
Nup98Q6PFD9 Gm13810-201ENSMUST00000118584 1347 ntBASIC14.98□□□□□ -0.01
Nup98Q6PFD9 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC14.98□□□□□ -0.01
Nup98Q6PFD9 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nup98Q6PFD9 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nup98Q6PFD9 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nup98Q6PFD9 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nup98Q6PFD9 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Nup98Q6PFD9 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nup98Q6PFD9 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Nup98Q6PFD9 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nup98Q6PFD9 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nup98Q6PFD9 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Nup98Q6PFD9 Gm23949-201ENSMUST00000104027 127 ntBASIC14.98□□□□□ -0.01
Nup98Q6PFD9 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC14.98□□□□□ -0.01
Nup98Q6PFD9 Gm12566-201ENSMUST00000121479 359 ntBASIC14.98□□□□□ -0.01
Nup98Q6PFD9 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC14.98□□□□□ -0.01
Nup98Q6PFD9 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC14.98□□□□□ -0.01
Nup98Q6PFD9 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC14.98□□□□□ -0.01
Nup98Q6PFD9 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC14.98□□□□□ -0.01
Nup98Q6PFD9 Gm45598-202ENSMUST00000210719 986 ntBASIC14.98□□□□□ -0.01
Nup98Q6PFD9 Gm17827-201ENSMUST00000211825 742 ntBASIC14.98□□□□□ -0.01
Nup98Q6PFD9 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC14.98□□□□□ -0.01
Nup98Q6PFD9 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC14.98□□□□□ -0.01
Nup98Q6PFD9 CT025694.1-201ENSMUST00000226188 934 ntBASIC14.98□□□□□ -0.01
Nup98Q6PFD9 Gm26035-201ENSMUST00000083065 308 ntBASIC14.98□□□□□ -0.01
Nup98Q6PFD9 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Nup98Q6PFD9 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Nup98Q6PFD9 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Nup98Q6PFD9 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Nup98Q6PFD9 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Nup98Q6PFD9 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
Nup98Q6PFD9 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nup98Q6PFD9 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nup98Q6PFD9 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nup98Q6PFD9 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nup98Q6PFD9 Gm11989-201ENSMUST00000117240 672 ntBASIC14.97□□□□□ -0.01
Nup98Q6PFD9 Gm11362-201ENSMUST00000118838 850 ntBASIC14.97□□□□□ -0.01
Nup98Q6PFD9 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC14.97□□□□□ -0.01
Nup98Q6PFD9 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nup98Q6PFD9 Gm10051-201ENSMUST00000145209 414 ntBASIC14.97□□□□□ -0.01
Nup98Q6PFD9 H2-Q3-201ENSMUST00000172583 608 ntBASIC14.97□□□□□ -0.01
Nup98Q6PFD9 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Nup98Q6PFD9 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC14.97□□□□□ -0.01
Nup98Q6PFD9 Gm5369-201ENSMUST00000217499 588 ntBASIC14.97□□□□□ -0.01
Nup98Q6PFD9 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nup98Q6PFD9 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nup98Q6PFD9 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nup98Q6PFD9 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC14.97□□□□□ -0.01
Nup98Q6PFD9 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Nup98Q6PFD9 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nup98Q6PFD9 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nup98Q6PFD9 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nup98Q6PFD9 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nup98Q6PFD9 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Nup98Q6PFD9 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nup98Q6PFD9 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Nup98Q6PFD9 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Nup98Q6PFD9 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC14.97□□□□□ -0.01
Nup98Q6PFD9 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC14.97□□□□□ -0.01
Nup98Q6PFD9 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC14.97□□□□□ -0.01
Nup98Q6PFD9 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Nup98Q6PFD9 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Nup98Q6PFD9 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nup98Q6PFD9 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms