Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Krt39Q6IFX4 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Krt39Q6IFX4 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Krt39Q6IFX4 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Krt39Q6IFX4 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Krt39Q6IFX4 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Krt39Q6IFX4 Gm12859-201ENSMUST00000117834 427 ntBASIC14.32□□□□□ -0.12
Krt39Q6IFX4 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Krt39Q6IFX4 Gm5354-201ENSMUST00000182417 973 ntBASIC14.32□□□□□ -0.12
Krt39Q6IFX4 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC14.32□□□□□ -0.12
Krt39Q6IFX4 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Krt39Q6IFX4 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Krt39Q6IFX4 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC14.32□□□□□ -0.12
Krt39Q6IFX4 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Krt39Q6IFX4 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Krt39Q6IFX4 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Krt39Q6IFX4 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Krt39Q6IFX4 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC14.32□□□□□ -0.12
Krt39Q6IFX4 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Krt39Q6IFX4 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Krt39Q6IFX4 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Krt39Q6IFX4 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Krt39Q6IFX4 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Krt39Q6IFX4 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Krt39Q6IFX4 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Krt39Q6IFX4 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Krt39Q6IFX4 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Krt39Q6IFX4 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Krt39Q6IFX4 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Krt39Q6IFX4 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Krt39Q6IFX4 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Krt39Q6IFX4 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Krt39Q6IFX4 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Krt39Q6IFX4 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Krt39Q6IFX4 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Krt39Q6IFX4 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC14.31□□□□□ -0.12
Krt39Q6IFX4 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Krt39Q6IFX4 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Krt39Q6IFX4 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Krt39Q6IFX4 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Krt39Q6IFX4 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Krt39Q6IFX4 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Krt39Q6IFX4 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Krt39Q6IFX4 Gm16342-201ENSMUST00000124025 1025 ntBASIC14.31□□□□□ -0.12
Krt39Q6IFX4 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Krt39Q6IFX4 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC14.31□□□□□ -0.12
Krt39Q6IFX4 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Krt39Q6IFX4 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Krt39Q6IFX4 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC14.31□□□□□ -0.12
Krt39Q6IFX4 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Krt39Q6IFX4 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC14.31□□□□□ -0.12
Krt39Q6IFX4 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Krt39Q6IFX4 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Krt39Q6IFX4 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Krt39Q6IFX4 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC14.31□□□□□ -0.12
Krt39Q6IFX4 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Krt39Q6IFX4 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Krt39Q6IFX4 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Krt39Q6IFX4 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Krt39Q6IFX4 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Krt39Q6IFX4 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Krt39Q6IFX4 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC14.31□□□□□ -0.12
Krt39Q6IFX4 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Krt39Q6IFX4 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC14.31□□□□□ -0.12
Krt39Q6IFX4 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Krt39Q6IFX4 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Krt39Q6IFX4 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Krt39Q6IFX4 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Krt39Q6IFX4 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC14.3□□□□□ -0.12
Krt39Q6IFX4 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Krt39Q6IFX4 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Krt39Q6IFX4 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Krt39Q6IFX4 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Krt39Q6IFX4 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Krt39Q6IFX4 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Krt39Q6IFX4 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC14.3□□□□□ -0.12
Krt39Q6IFX4 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Krt39Q6IFX4 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC14.3□□□□□ -0.12
Krt39Q6IFX4 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Krt39Q6IFX4 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Krt39Q6IFX4 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC14.3□□□□□ -0.12
Krt39Q6IFX4 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC14.3□□□□□ -0.12
Krt39Q6IFX4 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Krt39Q6IFX4 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Krt39Q6IFX4 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Krt39Q6IFX4 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Krt39Q6IFX4 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC14.3□□□□□ -0.12
Krt39Q6IFX4 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC14.3□□□□□ -0.12
Krt39Q6IFX4 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Krt39Q6IFX4 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Krt39Q6IFX4 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Krt39Q6IFX4 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Krt39Q6IFX4 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Krt39Q6IFX4 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Krt39Q6IFX4 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Krt39Q6IFX4 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Krt39Q6IFX4 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Krt39Q6IFX4 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC14.3□□□□□ -0.12
Krt39Q6IFX4 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Krt39Q6IFX4 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 81 ms