Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Six4Q61321 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Six4Q61321 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Six4Q61321 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Six4Q61321 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.05□□□□□ -0.32
Six4Q61321 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Six4Q61321 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Six4Q61321 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC13.05□□□□□ -0.32
Six4Q61321 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Six4Q61321 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Six4Q61321 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
Six4Q61321 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Six4Q61321 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Six4Q61321 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Six4Q61321 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC13.05□□□□□ -0.32
Six4Q61321 Gm14127-201ENSMUST00000117906 678 ntBASIC13.05□□□□□ -0.32
Six4Q61321 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Six4Q61321 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC13.05□□□□□ -0.32
Six4Q61321 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Six4Q61321 Gm43416-201ENSMUST00000201916 1015 ntBASIC13.05□□□□□ -0.32
Six4Q61321 Zkscan3-207ENSMUST00000223831 2101 ntBASIC13.05□□□□□ -0.32
Six4Q61321 AC093022.5-201ENSMUST00000226841 1079 ntBASIC13.05□□□□□ -0.32
Six4Q61321 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Six4Q61321 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC13.05□□□□□ -0.32
Six4Q61321 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Six4Q61321 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Six4Q61321 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Six4Q61321 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Six4Q61321 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Six4Q61321 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Six4Q61321 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC13.05□□□□□ -0.32
Six4Q61321 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.05□□□□□ -0.32
Six4Q61321 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Six4Q61321 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Six4Q61321 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Six4Q61321 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Six4Q61321 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Six4Q61321 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC13.05□□□□□ -0.32
Six4Q61321 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Six4Q61321 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Six4Q61321 AC241621.2-201ENSMUST00000223991 2151 ntBASIC13.04□□□□□ -0.32
Six4Q61321 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Six4Q61321 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Six4Q61321 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Six4Q61321 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Six4Q61321 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC13.04□□□□□ -0.32
Six4Q61321 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC13.04□□□□□ -0.32
Six4Q61321 Gm13813-201ENSMUST00000120998 787 ntBASIC13.04□□□□□ -0.32
Six4Q61321 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Six4Q61321 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Six4Q61321 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Six4Q61321 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Six4Q61321 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Six4Q61321 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Six4Q61321 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Six4Q61321 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Six4Q61321 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Six4Q61321 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Six4Q61321 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Six4Q61321 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Six4Q61321 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Six4Q61321 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC13.04□□□□□ -0.32
Six4Q61321 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Six4Q61321 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Six4Q61321 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Six4Q61321 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Six4Q61321 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
Six4Q61321 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Six4Q61321 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.04□□□□□ -0.32
Six4Q61321 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Six4Q61321 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Six4Q61321 Gm44775-201ENSMUST00000207266 1456 ntBASIC13.04□□□□□ -0.32
Six4Q61321 AC131068.2-201ENSMUST00000226175 1453 ntBASIC13.04□□□□□ -0.32
Six4Q61321 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Six4Q61321 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Six4Q61321 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.03□□□□□ -0.32
Six4Q61321 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Six4Q61321 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Six4Q61321 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Six4Q61321 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Six4Q61321 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Six4Q61321 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Six4Q61321 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.03□□□□□ -0.32
Six4Q61321 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Six4Q61321 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Six4Q61321 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Six4Q61321 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Six4Q61321 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC13.03□□□□□ -0.32
Six4Q61321 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Six4Q61321 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC13.03□□□□□ -0.32
Six4Q61321 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC13.03□□□□□ -0.32
Six4Q61321 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Six4Q61321 Gm18062-201ENSMUST00000208020 547 ntBASIC13.03□□□□□ -0.32
Six4Q61321 Gm18055-201ENSMUST00000208254 547 ntBASIC13.03□□□□□ -0.32
Six4Q61321 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC13.03□□□□□ -0.32
Six4Q61321 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Six4Q61321 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Six4Q61321 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Six4Q61321 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Six4Q61321 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms