Protein–RNA interactions for Protein: Q61124

Cln3, Battenin, mousemouse

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3Q61124 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cln3Q61124 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cln3Q61124 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Cln3Q61124 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cln3Q61124 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cln3Q61124 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.14□□□□□ -0.15
Cln3Q61124 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cln3Q61124 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cln3Q61124 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cln3Q61124 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cln3Q61124 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cln3Q61124 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC14.14□□□□□ -0.15
Cln3Q61124 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC14.14□□□□□ -0.15
Cln3Q61124 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
Cln3Q61124 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC14.14□□□□□ -0.15
Cln3Q61124 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cln3Q61124 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC14.14□□□□□ -0.15
Cln3Q61124 Gm34767-201ENSMUST00000191813 1062 ntBASIC14.14□□□□□ -0.15
Cln3Q61124 Gm42997-202ENSMUST00000200321 985 ntBASIC14.14□□□□□ -0.15
Cln3Q61124 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC14.14□□□□□ -0.15
Cln3Q61124 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cln3Q61124 Gm39404-201ENSMUST00000216350 313 ntBASIC14.14□□□□□ -0.15
Cln3Q61124 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Cln3Q61124 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cln3Q61124 Gm10312-201ENSMUST00000078515 489 ntBASIC14.14□□□□□ -0.15
Cln3Q61124 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cln3Q61124 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cln3Q61124 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cln3Q61124 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cln3Q61124 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cln3Q61124 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cln3Q61124 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cln3Q61124 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cln3Q61124 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cln3Q61124 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cln3Q61124 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cln3Q61124 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cln3Q61124 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cln3Q61124 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cln3Q61124 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cln3Q61124 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cln3Q61124 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cln3Q61124 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Cln3Q61124 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cln3Q61124 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cln3Q61124 Gm5884-201ENSMUST00000036712 1479 ntBASIC14.13□□□□□ -0.15
Cln3Q61124 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cln3Q61124 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.13□□□□□ -0.15
Cln3Q61124 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cln3Q61124 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
Cln3Q61124 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cln3Q61124 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cln3Q61124 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cln3Q61124 Vmn1r207-ps-201ENSMUST00000119931 1073 ntBASIC14.13□□□□□ -0.15
Cln3Q61124 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC14.13□□□□□ -0.15
Cln3Q61124 Gm5070-201ENSMUST00000177599 862 ntBASIC14.13□□□□□ -0.15
Cln3Q61124 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cln3Q61124 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC14.13□□□□□ -0.15
Cln3Q61124 Gm43947-201ENSMUST00000203019 959 ntBASIC14.13□□□□□ -0.15
Cln3Q61124 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cln3Q61124 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cln3Q61124 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC14.13□□□□□ -0.15
Cln3Q61124 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cln3Q61124 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Cln3Q61124 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14.13□□□□□ -0.15
Cln3Q61124 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cln3Q61124 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cln3Q61124 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Cln3Q61124 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cln3Q61124 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cln3Q61124 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
Cln3Q61124 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cln3Q61124 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cln3Q61124 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cln3Q61124 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.12□□□□□ -0.15
Cln3Q61124 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Cln3Q61124 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cln3Q61124 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cln3Q61124 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cln3Q61124 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cln3Q61124 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cln3Q61124 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cln3Q61124 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cln3Q61124 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cln3Q61124 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cln3Q61124 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cln3Q61124 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cln3Q61124 Gm8798-201ENSMUST00000211877 1661 ntBASIC14.12□□□□□ -0.15
Cln3Q61124 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cln3Q61124 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cln3Q61124 Gm6963-201ENSMUST00000147879 379 ntBASIC14.12□□□□□ -0.15
Cln3Q61124 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
Cln3Q61124 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC14.12□□□□□ -0.15
Cln3Q61124 CT025694.1-201ENSMUST00000226188 934 ntBASIC14.12□□□□□ -0.15
Cln3Q61124 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cln3Q61124 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Cln3Q61124 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cln3Q61124 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cln3Q61124 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Cln3Q61124 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms