Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.45□□□□□ -0.42
ClpbQ60649 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ClpbQ60649 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ClpbQ60649 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ClpbQ60649 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ClpbQ60649 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ClpbQ60649 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.45□□□□□ -0.42
ClpbQ60649 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ClpbQ60649 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.45□□□□□ -0.42
ClpbQ60649 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.45□□□□□ -0.42
ClpbQ60649 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ClpbQ60649 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.45□□□□□ -0.42
ClpbQ60649 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.45□□□□□ -0.42
ClpbQ60649 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC12.45□□□□□ -0.42
ClpbQ60649 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ClpbQ60649 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ClpbQ60649 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ClpbQ60649 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ClpbQ60649 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
ClpbQ60649 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ClpbQ60649 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ClpbQ60649 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ClpbQ60649 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ClpbQ60649 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
ClpbQ60649 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ClpbQ60649 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
ClpbQ60649 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ClpbQ60649 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
ClpbQ60649 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
ClpbQ60649 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ClpbQ60649 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
ClpbQ60649 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ClpbQ60649 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
ClpbQ60649 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ClpbQ60649 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
ClpbQ60649 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ClpbQ60649 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.45□□□□□ -0.42
ClpbQ60649 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
ClpbQ60649 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
ClpbQ60649 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.44□□□□□ -0.42
ClpbQ60649 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ClpbQ60649 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ClpbQ60649 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ClpbQ60649 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
ClpbQ60649 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ClpbQ60649 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ClpbQ60649 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ClpbQ60649 Gm11803-201ENSMUST00000119966 444 ntBASIC12.44□□□□□ -0.42
ClpbQ60649 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.44□□□□□ -0.42
ClpbQ60649 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ClpbQ60649 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
ClpbQ60649 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ClpbQ60649 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ClpbQ60649 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ClpbQ60649 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ClpbQ60649 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
ClpbQ60649 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
ClpbQ60649 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ClpbQ60649 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ClpbQ60649 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
ClpbQ60649 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ClpbQ60649 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ClpbQ60649 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
ClpbQ60649 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
ClpbQ60649 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ClpbQ60649 Gm15544-201ENSMUST00000118776 1531 ntBASIC12.43□□□□□ -0.42
ClpbQ60649 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
ClpbQ60649 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.43□□□□□ -0.42
ClpbQ60649 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ClpbQ60649 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.43□□□□□ -0.42
ClpbQ60649 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.43□□□□□ -0.42
ClpbQ60649 Gm10156-201ENSMUST00000122364 462 ntBASIC12.43□□□□□ -0.42
ClpbQ60649 Mir1982-201ENSMUST00000157368 74 ntBASIC12.43□□□□□ -0.42
ClpbQ60649 Gm22331-201ENSMUST00000158066 136 ntBASIC12.43□□□□□ -0.42
ClpbQ60649 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ClpbQ60649 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
ClpbQ60649 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.43□□□□□ -0.42
ClpbQ60649 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ClpbQ60649 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.43□□□□□ -0.42
ClpbQ60649 Gm8810-201ENSMUST00000172895 754 ntBASIC12.43□□□□□ -0.42
ClpbQ60649 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
ClpbQ60649 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ClpbQ60649 Proscos-202ENSMUST00000178990 666 ntBASIC12.43□□□□□ -0.42
ClpbQ60649 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.43□□□□□ -0.42
ClpbQ60649 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.43□□□□□ -0.42
ClpbQ60649 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
ClpbQ60649 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.43□□□□□ -0.42
ClpbQ60649 Gm8598-201ENSMUST00000221184 836 ntBASIC12.43□□□□□ -0.42
ClpbQ60649 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.43□□□□□ -0.42
ClpbQ60649 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ClpbQ60649 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC12.43□□□□□ -0.42
ClpbQ60649 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ClpbQ60649 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ClpbQ60649 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.43□□□□□ -0.42
ClpbQ60649 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ClpbQ60649 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
ClpbQ60649 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
ClpbQ60649 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ClpbQ60649 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ClpbQ60649 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms