Protein–RNA interactions for Protein: Q60611

Satb1, DNA-binding protein SATB1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Satb1Q60611 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Satb1Q60611 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Satb1Q60611 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Satb1Q60611 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Satb1Q60611 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Satb1Q60611 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Satb1Q60611 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Satb1Q60611 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Satb1Q60611 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.47□□□□□ -0.25
Satb1Q60611 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Satb1Q60611 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Satb1Q60611 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Satb1Q60611 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Satb1Q60611 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Satb1Q60611 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Satb1Q60611 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Satb1Q60611 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Satb1Q60611 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC13.47□□□□□ -0.25
Satb1Q60611 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Satb1Q60611 Gm7857-201ENSMUST00000117957 358 ntBASIC13.47□□□□□ -0.25
Satb1Q60611 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Satb1Q60611 Gm29741-201ENSMUST00000192667 421 ntBASIC13.47□□□□□ -0.25
Satb1Q60611 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC13.47□□□□□ -0.25
Satb1Q60611 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Satb1Q60611 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Satb1Q60611 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Satb1Q60611 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Satb1Q60611 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Satb1Q60611 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Satb1Q60611 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Satb1Q60611 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Satb1Q60611 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Satb1Q60611 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Satb1Q60611 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Satb1Q60611 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Satb1Q60611 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Satb1Q60611 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Satb1Q60611 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Satb1Q60611 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC13.47□□□□□ -0.25
Satb1Q60611 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13.47□□□□□ -0.25
Satb1Q60611 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Satb1Q60611 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Satb1Q60611 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Satb1Q60611 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Satb1Q60611 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
Satb1Q60611 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Satb1Q60611 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Satb1Q60611 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Satb1Q60611 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Satb1Q60611 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Satb1Q60611 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC13.46□□□□□ -0.25
Satb1Q60611 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Satb1Q60611 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
Satb1Q60611 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Satb1Q60611 Gm12012-201ENSMUST00000118857 1066 ntBASIC13.46□□□□□ -0.25
Satb1Q60611 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC13.46□□□□□ -0.25
Satb1Q60611 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC13.46□□□□□ -0.25
Satb1Q60611 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Satb1Q60611 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC13.46□□□□□ -0.25
Satb1Q60611 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC13.46□□□□□ -0.25
Satb1Q60611 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC13.46□□□□□ -0.25
Satb1Q60611 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
Satb1Q60611 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC13.46□□□□□ -0.25
Satb1Q60611 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Satb1Q60611 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC13.46□□□□□ -0.25
Satb1Q60611 AC153974.2-201ENSMUST00000218577 1025 ntBASIC13.46□□□□□ -0.25
Satb1Q60611 Gm14267-206ENSMUST00000226870 1209 ntBASIC13.46□□□□□ -0.25
Satb1Q60611 Morn2-202ENSMUST00000227729 656 ntBASIC13.46□□□□□ -0.25
Satb1Q60611 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Satb1Q60611 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Satb1Q60611 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC13.46□□□□□ -0.25
Satb1Q60611 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Satb1Q60611 Gm10782-202ENSMUST00000223775 1480 ntBASIC13.46□□□□□ -0.25
Satb1Q60611 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Satb1Q60611 Gm37437-201ENSMUST00000194451 1937 ntBASIC13.46□□□□□ -0.25
Satb1Q60611 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
Satb1Q60611 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC13.46□□□□□ -0.25
Satb1Q60611 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Satb1Q60611 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC13.46□□□□□ -0.26
Satb1Q60611 Gm43056-201ENSMUST00000197865 2791 ntBASIC13.46□□□□□ -0.26
Satb1Q60611 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Satb1Q60611 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Satb1Q60611 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Satb1Q60611 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Satb1Q60611 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Satb1Q60611 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Satb1Q60611 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Satb1Q60611 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Satb1Q60611 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
Satb1Q60611 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Satb1Q60611 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Satb1Q60611 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
Satb1Q60611 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Satb1Q60611 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Satb1Q60611 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Satb1Q60611 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Satb1Q60611 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.45□□□□□ -0.26
Satb1Q60611 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Satb1Q60611 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Satb1Q60611 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms