Protein–RNA interactions for Protein: Q5SWD9

Tsr1, Pre-rRNA-processing protein TSR1 homolog, mousemouse

Predictions only

Length 803 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsr1Q5SWD9 Hormad1-203ENSMUST00000107154 1444 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Tsr1Q5SWD9 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Tsr1Q5SWD9 Gm19817-201ENSMUST00000199764 2132 ntBASIC14.08□□□□□ -0.16
Tsr1Q5SWD9 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Tsr1Q5SWD9 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tsr1Q5SWD9 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tsr1Q5SWD9 Gm12585-201ENSMUST00000117307 290 ntBASIC14.08□□□□□ -0.16
Tsr1Q5SWD9 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Tsr1Q5SWD9 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Tsr1Q5SWD9 Gm27231-201ENSMUST00000185191 551 ntTSL 5 BASIC14.08□□□□□ -0.16
Tsr1Q5SWD9 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC14.08□□□□□ -0.16
Tsr1Q5SWD9 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC14.08□□□□□ -0.16
Tsr1Q5SWD9 Gm5626-201ENSMUST00000222151 1058 ntBASIC14.08□□□□□ -0.16
Tsr1Q5SWD9 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tsr1Q5SWD9 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Tsr1Q5SWD9 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tsr1Q5SWD9 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Tsr1Q5SWD9 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tsr1Q5SWD9 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Tsr1Q5SWD9 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tsr1Q5SWD9 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Tsr1Q5SWD9 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tsr1Q5SWD9 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tsr1Q5SWD9 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tsr1Q5SWD9 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tsr1Q5SWD9 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Tsr1Q5SWD9 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tsr1Q5SWD9 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC14.07□□□□□ -0.16
Tsr1Q5SWD9 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Tsr1Q5SWD9 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Tsr1Q5SWD9 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tsr1Q5SWD9 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Tsr1Q5SWD9 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Tsr1Q5SWD9 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tsr1Q5SWD9 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tsr1Q5SWD9 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC14.07□□□□□ -0.16
Tsr1Q5SWD9 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Tsr1Q5SWD9 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tsr1Q5SWD9 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tsr1Q5SWD9 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tsr1Q5SWD9 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Tsr1Q5SWD9 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Tsr1Q5SWD9 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tsr1Q5SWD9 Gm15460-201ENSMUST00000118147 391 ntBASIC14.07□□□□□ -0.16
Tsr1Q5SWD9 Gm26722-201ENSMUST00000181237 1048 ntTSL 5 BASIC14.07□□□□□ -0.16
Tsr1Q5SWD9 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Tsr1Q5SWD9 Gm35611-201ENSMUST00000205323 799 ntTSL 3 BASIC14.07□□□□□ -0.16
Tsr1Q5SWD9 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Tsr1Q5SWD9 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC14.07□□□□□ -0.16
Tsr1Q5SWD9 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC14.07□□□□□ -0.16
Tsr1Q5SWD9 CT025552.1-201ENSMUST00000224561 521 ntBASIC14.07□□□□□ -0.16
Tsr1Q5SWD9 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tsr1Q5SWD9 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tsr1Q5SWD9 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Tsr1Q5SWD9 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tsr1Q5SWD9 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tsr1Q5SWD9 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tsr1Q5SWD9 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tsr1Q5SWD9 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tsr1Q5SWD9 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tsr1Q5SWD9 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tsr1Q5SWD9 Gm42479-201ENSMUST00000198654 1356 ntBASIC14.07□□□□□ -0.16
Tsr1Q5SWD9 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tsr1Q5SWD9 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Tsr1Q5SWD9 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC14.07□□□□□ -0.16
Tsr1Q5SWD9 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tsr1Q5SWD9 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tsr1Q5SWD9 Gm13859-201ENSMUST00000119936 1423 ntBASIC14.07□□□□□ -0.16
Tsr1Q5SWD9 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tsr1Q5SWD9 Gm43045-201ENSMUST00000198725 2095 ntBASIC14.06□□□□□ -0.16
Tsr1Q5SWD9 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tsr1Q5SWD9 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tsr1Q5SWD9 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC14.06□□□□□ -0.16
Tsr1Q5SWD9 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tsr1Q5SWD9 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tsr1Q5SWD9 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tsr1Q5SWD9 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Tsr1Q5SWD9 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tsr1Q5SWD9 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC14.06□□□□□ -0.16
Tsr1Q5SWD9 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Tsr1Q5SWD9 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tsr1Q5SWD9 Nudt18-202ENSMUST00000228554 3619 ntBASIC14.06□□□□□ -0.16
Tsr1Q5SWD9 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tsr1Q5SWD9 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Tsr1Q5SWD9 Gm15393-201ENSMUST00000120499 219 ntBASIC14.06□□□□□ -0.16
Tsr1Q5SWD9 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Tsr1Q5SWD9 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Tsr1Q5SWD9 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC14.06□□□□□ -0.16
Tsr1Q5SWD9 Skint8-205ENSMUST00000165046 1280 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tsr1Q5SWD9 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tsr1Q5SWD9 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC14.06□□□□□ -0.16
Tsr1Q5SWD9 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Tsr1Q5SWD9 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Tsr1Q5SWD9 AC153872.1-201ENSMUST00000199539 128 ntBASIC14.06□□□□□ -0.16
Tsr1Q5SWD9 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC14.06□□□□□ -0.16
Tsr1Q5SWD9 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Tsr1Q5SWD9 Gm36278-201ENSMUST00000217030 918 ntTSL 5 BASIC14.06□□□□□ -0.16
Tsr1Q5SWD9 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Tsr1Q5SWD9 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tsr1Q5SWD9 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms