Protein–RNA interactions for Protein: Q5SP85

Ccdc85a, Coiled-coil domain-containing protein 85A, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85aQ5SP85 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc85aQ5SP85 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc85aQ5SP85 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc85aQ5SP85 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc85aQ5SP85 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc85aQ5SP85 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc85aQ5SP85 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc85aQ5SP85 Gm45495-201ENSMUST00000200940 1700 ntBASIC14.29□□□□□ -0.12
Ccdc85aQ5SP85 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc85aQ5SP85 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc85aQ5SP85 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Ccdc85aQ5SP85 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc85aQ5SP85 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc85aQ5SP85 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc85aQ5SP85 Gm26513-201ENSMUST00000181802 2489 ntBASIC14.29□□□□□ -0.12
Ccdc85aQ5SP85 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Ccdc85aQ5SP85 Gm13996-201ENSMUST00000118456 430 ntBASIC14.29□□□□□ -0.12
Ccdc85aQ5SP85 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
Ccdc85aQ5SP85 Gm12134-201ENSMUST00000122109 520 ntBASIC14.29□□□□□ -0.12
Ccdc85aQ5SP85 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC14.29□□□□□ -0.12
Ccdc85aQ5SP85 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc85aQ5SP85 Gm10109-202ENSMUST00000206890 1211 ntBASIC14.29□□□□□ -0.12
Ccdc85aQ5SP85 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc85aQ5SP85 AC166051.1-201ENSMUST00000214313 210 ntBASIC14.29□□□□□ -0.12
Ccdc85aQ5SP85 Gzmn-202ENSMUST00000225535 989 ntBASIC14.29□□□□□ -0.12
Ccdc85aQ5SP85 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc85aQ5SP85 AC167013.1-201ENSMUST00000228592 202 ntBASIC14.29□□□□□ -0.12
Ccdc85aQ5SP85 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc85aQ5SP85 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC14.29□□□□□ -0.12
Ccdc85aQ5SP85 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc85aQ5SP85 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc85aQ5SP85 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc85aQ5SP85 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc85aQ5SP85 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc85aQ5SP85 Gm10702-201ENSMUST00000098929 1268 ntBASIC14.29□□□□□ -0.12
Ccdc85aQ5SP85 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
Ccdc85aQ5SP85 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Ccdc85aQ5SP85 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc85aQ5SP85 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc85aQ5SP85 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc85aQ5SP85 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC14.29□□□□□ -0.12
Ccdc85aQ5SP85 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.29□□□□□ -0.12
Ccdc85aQ5SP85 Nrf1-206ENSMUST00000115204 2047 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc85aQ5SP85 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc85aQ5SP85 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc85aQ5SP85 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc85aQ5SP85 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Ccdc85aQ5SP85 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc85aQ5SP85 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc85aQ5SP85 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc85aQ5SP85 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc85aQ5SP85 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc85aQ5SP85 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc85aQ5SP85 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC14.28□□□□□ -0.12
Ccdc85aQ5SP85 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.28□□□□□ -0.12
Ccdc85aQ5SP85 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc85aQ5SP85 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc85aQ5SP85 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC14.28□□□□□ -0.12
Ccdc85aQ5SP85 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc85aQ5SP85 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc85aQ5SP85 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Ccdc85aQ5SP85 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc85aQ5SP85 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc85aQ5SP85 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc85aQ5SP85 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc85aQ5SP85 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc85aQ5SP85 Gm37201-201ENSMUST00000191845 523 ntBASIC14.28□□□□□ -0.12
Ccdc85aQ5SP85 Gm10305-201ENSMUST00000195331 2475 ntBASIC14.28□□□□□ -0.12
Ccdc85aQ5SP85 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc85aQ5SP85 Gm43416-201ENSMUST00000201916 1015 ntBASIC14.28□□□□□ -0.12
Ccdc85aQ5SP85 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc85aQ5SP85 Gm45433-201ENSMUST00000209386 247 ntBASIC14.28□□□□□ -0.12
Ccdc85aQ5SP85 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC14.28□□□□□ -0.12
Ccdc85aQ5SP85 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC14.28□□□□□ -0.12
Ccdc85aQ5SP85 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC14.28□□□□□ -0.12
Ccdc85aQ5SP85 Gm18556-201ENSMUST00000219748 1031 ntBASIC14.28□□□□□ -0.12
Ccdc85aQ5SP85 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc85aQ5SP85 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc85aQ5SP85 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc85aQ5SP85 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc85aQ5SP85 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc85aQ5SP85 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc85aQ5SP85 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc85aQ5SP85 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc85aQ5SP85 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc85aQ5SP85 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc85aQ5SP85 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Ccdc85aQ5SP85 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc85aQ5SP85 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc85aQ5SP85 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc85aQ5SP85 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc85aQ5SP85 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc85aQ5SP85 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc85aQ5SP85 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc85aQ5SP85 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc85aQ5SP85 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc85aQ5SP85 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc85aQ5SP85 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC14.27□□□□□ -0.12
Ccdc85aQ5SP85 CAAA01216754.1-201ENSMUST00000215882 1836 ntBASIC14.27□□□□□ -0.12
Ccdc85aQ5SP85 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms