Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim80Q3V061 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Trim80Q3V061 Gm42863-201ENSMUST00000197875 2958 ntBASIC13.42□□□□□ -0.26
Trim80Q3V061 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim80Q3V061 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim80Q3V061 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim80Q3V061 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim80Q3V061 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trim80Q3V061 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim80Q3V061 Gm37472-201ENSMUST00000192342 4052 ntBASIC13.42□□□□□ -0.26
Trim80Q3V061 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Trim80Q3V061 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim80Q3V061 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim80Q3V061 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trim80Q3V061 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim80Q3V061 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim80Q3V061 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim80Q3V061 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trim80Q3V061 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trim80Q3V061 Gm15459-201ENSMUST00000117405 1941 ntBASIC13.41□□□□□ -0.26
Trim80Q3V061 Gm8355-201ENSMUST00000177767 1941 ntBASIC13.41□□□□□ -0.26
Trim80Q3V061 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim80Q3V061 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim80Q3V061 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim80Q3V061 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
Trim80Q3V061 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim80Q3V061 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim80Q3V061 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
Trim80Q3V061 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Trim80Q3V061 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC13.41□□□□□ -0.26
Trim80Q3V061 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim80Q3V061 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trim80Q3V061 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Trim80Q3V061 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trim80Q3V061 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC13.41□□□□□ -0.26
Trim80Q3V061 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trim80Q3V061 AC153962.4-201ENSMUST00000217878 242 ntBASIC13.41□□□□□ -0.26
Trim80Q3V061 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim80Q3V061 Gm9797-201ENSMUST00000052902 613 ntBASIC13.41□□□□□ -0.26
Trim80Q3V061 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Trim80Q3V061 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim80Q3V061 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim80Q3V061 Gm37269-201ENSMUST00000193906 1891 ntBASIC13.41□□□□□ -0.26
Trim80Q3V061 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim80Q3V061 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trim80Q3V061 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim80Q3V061 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim80Q3V061 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim80Q3V061 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trim80Q3V061 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim80Q3V061 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim80Q3V061 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trim80Q3V061 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Trim80Q3V061 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.41□□□□□ -0.26
Trim80Q3V061 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim80Q3V061 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim80Q3V061 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trim80Q3V061 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim80Q3V061 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Trim80Q3V061 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim80Q3V061 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim80Q3V061 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Trim80Q3V061 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim80Q3V061 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trim80Q3V061 Mir698-201ENSMUST00000102164 109 ntBASIC13.4□□□□□ -0.26
Trim80Q3V061 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim80Q3V061 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC13.4□□□□□ -0.26
Trim80Q3V061 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC13.4□□□□□ -0.26
Trim80Q3V061 Gm15824-201ENSMUST00000119516 955 ntBASIC13.4□□□□□ -0.26
Trim80Q3V061 Gm12138-201ENSMUST00000122180 951 ntBASIC13.4□□□□□ -0.26
Trim80Q3V061 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC13.4□□□□□ -0.26
Trim80Q3V061 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trim80Q3V061 Gm28760-201ENSMUST00000185995 736 ntBASIC13.4□□□□□ -0.26
Trim80Q3V061 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Trim80Q3V061 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim80Q3V061 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Trim80Q3V061 Mir125a-201ENSMUST00000083545 68 ntBASIC13.4□□□□□ -0.26
Trim80Q3V061 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trim80Q3V061 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim80Q3V061 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim80Q3V061 Gm19817-201ENSMUST00000199764 2132 ntBASIC13.4□□□□□ -0.26
Trim80Q3V061 AC139350.1-201ENSMUST00000227064 1594 ntBASIC13.4□□□□□ -0.26
Trim80Q3V061 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim80Q3V061 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim80Q3V061 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim80Q3V061 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim80Q3V061 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim80Q3V061 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trim80Q3V061 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim80Q3V061 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trim80Q3V061 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim80Q3V061 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim80Q3V061 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Trim80Q3V061 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
Trim80Q3V061 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim80Q3V061 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim80Q3V061 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC13.39□□□□□ -0.27
Trim80Q3V061 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.39□□□□□ -0.27
Trim80Q3V061 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim80Q3V061 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms