Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cks1brtQ3UNC9 Svil-211ENSMUST00000143254 6594 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
Cks1brtQ3UNC9 Tbc1d17-201ENSMUST00000047085 8750 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cks1brtQ3UNC9 Bcl9-201ENSMUST00000046521 6102 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cks1brtQ3UNC9 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cks1brtQ3UNC9 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cks1brtQ3UNC9 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
Cks1brtQ3UNC9 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Cks1brtQ3UNC9 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Cks1brtQ3UNC9 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cks1brtQ3UNC9 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Cks1brtQ3UNC9 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cks1brtQ3UNC9 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cks1brtQ3UNC9 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cks1brtQ3UNC9 Mir698-201ENSMUST00000102164 109 ntBASIC9.26□□□□□ -0.93
Cks1brtQ3UNC9 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
Cks1brtQ3UNC9 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Cks1brtQ3UNC9 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
Cks1brtQ3UNC9 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Cks1brtQ3UNC9 Gm16198-201ENSMUST00000118766 670 ntBASIC9.26□□□□□ -0.93
Cks1brtQ3UNC9 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Cks1brtQ3UNC9 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC9.26□□□□□ -0.93
Cks1brtQ3UNC9 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC9.26□□□□□ -0.93
Cks1brtQ3UNC9 Gm27920-201ENSMUST00000183953 96 ntBASIC9.26□□□□□ -0.93
Cks1brtQ3UNC9 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC9.26□□□□□ -0.93
Cks1brtQ3UNC9 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC9.26□□□□□ -0.93
Cks1brtQ3UNC9 Gm18934-201ENSMUST00000216671 1044 ntBASIC9.26□□□□□ -0.93
Cks1brtQ3UNC9 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
Cks1brtQ3UNC9 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cks1brtQ3UNC9 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cks1brtQ3UNC9 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
Cks1brtQ3UNC9 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
Cks1brtQ3UNC9 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Cks1brtQ3UNC9 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cks1brtQ3UNC9 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Cks1brtQ3UNC9 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Cks1brtQ3UNC9 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Cks1brtQ3UNC9 Nup50-201ENSMUST00000165443 4741 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cks1brtQ3UNC9 Phf24-203ENSMUST00000107976 6538 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Cks1brtQ3UNC9 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cks1brtQ3UNC9 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
Cks1brtQ3UNC9 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cks1brtQ3UNC9 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Cks1brtQ3UNC9 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cks1brtQ3UNC9 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cks1brtQ3UNC9 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cks1brtQ3UNC9 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cks1brtQ3UNC9 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cks1brtQ3UNC9 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC9.25□□□□□ -0.93
Cks1brtQ3UNC9 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cks1brtQ3UNC9 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC9.25□□□□□ -0.93
Cks1brtQ3UNC9 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cks1brtQ3UNC9 Gm44758-201ENSMUST00000206096 2068 ntBASIC9.25□□□□□ -0.93
Cks1brtQ3UNC9 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cks1brtQ3UNC9 Zdbf2-201ENSMUST00000029025 12112 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cks1brtQ3UNC9 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cks1brtQ3UNC9 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Cks1brtQ3UNC9 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Cks1brtQ3UNC9 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cks1brtQ3UNC9 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Cks1brtQ3UNC9 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cks1brtQ3UNC9 Zkscan3-207ENSMUST00000223831 2101 ntBASIC9.25□□□□□ -0.93
Cks1brtQ3UNC9 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cks1brtQ3UNC9 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cks1brtQ3UNC9 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC9.25□□□□□ -0.93
Cks1brtQ3UNC9 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cks1brtQ3UNC9 Cacna2d4-201ENSMUST00000037434 5803 ntAPPRIS P3 TSL 2 BASIC9.25□□□□□ -0.93
Cks1brtQ3UNC9 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cks1brtQ3UNC9 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Cks1brtQ3UNC9 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cks1brtQ3UNC9 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC9.25□□□□□ -0.93
Cks1brtQ3UNC9 Gm6443-201ENSMUST00000203599 874 ntBASIC9.25□□□□□ -0.93
Cks1brtQ3UNC9 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC9.25□□□□□ -0.93
Cks1brtQ3UNC9 AC166997.1-201ENSMUST00000225122 572 ntBASIC9.25□□□□□ -0.93
Cks1brtQ3UNC9 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cks1brtQ3UNC9 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cks1brtQ3UNC9 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cks1brtQ3UNC9 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cks1brtQ3UNC9 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cks1brtQ3UNC9 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Cks1brtQ3UNC9 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Cks1brtQ3UNC9 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cks1brtQ3UNC9 Sez6l-205ENSMUST00000212480 5857 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
Cks1brtQ3UNC9 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cks1brtQ3UNC9 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cks1brtQ3UNC9 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Cks1brtQ3UNC9 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Cks1brtQ3UNC9 Gm36970-201ENSMUST00000193688 1859 ntBASIC9.25□□□□□ -0.93
Cks1brtQ3UNC9 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cks1brtQ3UNC9 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cks1brtQ3UNC9 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Cks1brtQ3UNC9 Kmt2a-202ENSMUST00000114689 16470 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
Cks1brtQ3UNC9 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cks1brtQ3UNC9 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cks1brtQ3UNC9 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cks1brtQ3UNC9 Gria1-201ENSMUST00000036315 5546 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cks1brtQ3UNC9 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Cks1brtQ3UNC9 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cks1brtQ3UNC9 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Cks1brtQ3UNC9 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms