Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC13.87□□□□□ -0.19
Upf3bQ3ULL6 Gm26185-201ENSMUST00000157692 266 ntBASIC13.87□□□□□ -0.19
Upf3bQ3ULL6 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
Upf3bQ3ULL6 Gm8835-201ENSMUST00000173096 1169 ntBASIC13.87□□□□□ -0.19
Upf3bQ3ULL6 Gm43818-201ENSMUST00000200605 466 ntBASIC13.87□□□□□ -0.19
Upf3bQ3ULL6 Gm9299-201ENSMUST00000206392 1140 ntBASIC13.87□□□□□ -0.19
Upf3bQ3ULL6 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC13.87□□□□□ -0.19
Upf3bQ3ULL6 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC13.87□□□□□ -0.19
Upf3bQ3ULL6 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Upf3bQ3ULL6 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Upf3bQ3ULL6 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Upf3bQ3ULL6 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Upf3bQ3ULL6 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.87□□□□□ -0.19
Upf3bQ3ULL6 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Upf3bQ3ULL6 Gm15222-202ENSMUST00000228667 1726 ntBASIC13.87□□□□□ -0.19
Upf3bQ3ULL6 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Upf3bQ3ULL6 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Upf3bQ3ULL6 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Upf3bQ3ULL6 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Upf3bQ3ULL6 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Upf3bQ3ULL6 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Upf3bQ3ULL6 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC13.86□□□□□ -0.19
Upf3bQ3ULL6 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Upf3bQ3ULL6 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Upf3bQ3ULL6 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Upf3bQ3ULL6 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Upf3bQ3ULL6 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Upf3bQ3ULL6 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Upf3bQ3ULL6 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Upf3bQ3ULL6 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Upf3bQ3ULL6 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Upf3bQ3ULL6 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Upf3bQ3ULL6 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Upf3bQ3ULL6 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Upf3bQ3ULL6 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Upf3bQ3ULL6 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Upf3bQ3ULL6 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Upf3bQ3ULL6 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Upf3bQ3ULL6 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
Upf3bQ3ULL6 AC122459.1-201ENSMUST00000228373 885 ntBASIC13.86□□□□□ -0.19
Upf3bQ3ULL6 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Upf3bQ3ULL6 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Upf3bQ3ULL6 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC13.86□□□□□ -0.19
Upf3bQ3ULL6 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Upf3bQ3ULL6 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Upf3bQ3ULL6 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Upf3bQ3ULL6 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Upf3bQ3ULL6 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Upf3bQ3ULL6 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Upf3bQ3ULL6 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Upf3bQ3ULL6 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Upf3bQ3ULL6 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Upf3bQ3ULL6 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC13.86□□□□□ -0.19
Upf3bQ3ULL6 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Upf3bQ3ULL6 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Upf3bQ3ULL6 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Upf3bQ3ULL6 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Upf3bQ3ULL6 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Upf3bQ3ULL6 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Upf3bQ3ULL6 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
Upf3bQ3ULL6 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
Upf3bQ3ULL6 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Upf3bQ3ULL6 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Upf3bQ3ULL6 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC13.85□□□□□ -0.19
Upf3bQ3ULL6 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Upf3bQ3ULL6 Gm9061-201ENSMUST00000182707 1006 ntBASIC13.85□□□□□ -0.19
Upf3bQ3ULL6 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC13.85□□□□□ -0.19
Upf3bQ3ULL6 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Upf3bQ3ULL6 Ighv8-10-201ENSMUST00000199579 358 ntBASIC13.85□□□□□ -0.19
Upf3bQ3ULL6 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Upf3bQ3ULL6 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC13.85□□□□□ -0.19
Upf3bQ3ULL6 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.85□□□□□ -0.19
Upf3bQ3ULL6 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Upf3bQ3ULL6 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Upf3bQ3ULL6 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Upf3bQ3ULL6 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Upf3bQ3ULL6 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Upf3bQ3ULL6 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC13.85□□□□□ -0.19
Upf3bQ3ULL6 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Upf3bQ3ULL6 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Upf3bQ3ULL6 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Upf3bQ3ULL6 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Upf3bQ3ULL6 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Upf3bQ3ULL6 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Upf3bQ3ULL6 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Upf3bQ3ULL6 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC13.84□□□□□ -0.19
Upf3bQ3ULL6 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Upf3bQ3ULL6 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Upf3bQ3ULL6 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
Upf3bQ3ULL6 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
Upf3bQ3ULL6 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Upf3bQ3ULL6 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC13.84□□□□□ -0.19
Upf3bQ3ULL6 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Upf3bQ3ULL6 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Upf3bQ3ULL6 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Upf3bQ3ULL6 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Upf3bQ3ULL6 Gm5385-201ENSMUST00000118988 1559 ntBASIC13.84□□□□□ -0.19
Upf3bQ3ULL6 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Upf3bQ3ULL6 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Upf3bQ3ULL6 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms