Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Upf3aQ3ULJ3 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC13.6□□□□□ -0.23
Upf3aQ3ULJ3 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Upf3aQ3ULJ3 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC13.6□□□□□ -0.23
Upf3aQ3ULJ3 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Upf3aQ3ULJ3 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC13.6□□□□□ -0.23
Upf3aQ3ULJ3 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Upf3aQ3ULJ3 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC13.6□□□□□ -0.23
Upf3aQ3ULJ3 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Upf3aQ3ULJ3 Gm6652-201ENSMUST00000186414 1070 ntBASIC13.6□□□□□ -0.23
Upf3aQ3ULJ3 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Upf3aQ3ULJ3 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC13.6□□□□□ -0.23
Upf3aQ3ULJ3 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Upf3aQ3ULJ3 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Upf3aQ3ULJ3 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Upf3aQ3ULJ3 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC13.6□□□□□ -0.23
Upf3aQ3ULJ3 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Upf3aQ3ULJ3 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC13.6□□□□□ -0.23
Upf3aQ3ULJ3 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Upf3aQ3ULJ3 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Upf3aQ3ULJ3 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Upf3aQ3ULJ3 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Upf3aQ3ULJ3 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Upf3aQ3ULJ3 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Upf3aQ3ULJ3 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Upf3aQ3ULJ3 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Upf3aQ3ULJ3 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Upf3aQ3ULJ3 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Upf3aQ3ULJ3 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Upf3aQ3ULJ3 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.6□□□□□ -0.23
Upf3aQ3ULJ3 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Upf3aQ3ULJ3 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.6□□□□□ -0.23
Upf3aQ3ULJ3 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Upf3aQ3ULJ3 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Upf3aQ3ULJ3 Gm9333-201ENSMUST00000205452 1323 ntBASIC13.6□□□□□ -0.23
Upf3aQ3ULJ3 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Upf3aQ3ULJ3 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Upf3aQ3ULJ3 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Upf3aQ3ULJ3 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Upf3aQ3ULJ3 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Upf3aQ3ULJ3 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Upf3aQ3ULJ3 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Upf3aQ3ULJ3 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Upf3aQ3ULJ3 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Upf3aQ3ULJ3 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Upf3aQ3ULJ3 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Upf3aQ3ULJ3 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.59□□□□□ -0.23
Upf3aQ3ULJ3 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Upf3aQ3ULJ3 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Upf3aQ3ULJ3 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Upf3aQ3ULJ3 Gm5846-201ENSMUST00000193146 1414 ntBASIC13.59□□□□□ -0.23
Upf3aQ3ULJ3 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Upf3aQ3ULJ3 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Upf3aQ3ULJ3 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Upf3aQ3ULJ3 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Upf3aQ3ULJ3 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Upf3aQ3ULJ3 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Upf3aQ3ULJ3 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Upf3aQ3ULJ3 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC13.59□□□□□ -0.23
Upf3aQ3ULJ3 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC13.59□□□□□ -0.23
Upf3aQ3ULJ3 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC13.59□□□□□ -0.23
Upf3aQ3ULJ3 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Upf3aQ3ULJ3 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Upf3aQ3ULJ3 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Upf3aQ3ULJ3 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Upf3aQ3ULJ3 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Upf3aQ3ULJ3 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Upf3aQ3ULJ3 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Upf3aQ3ULJ3 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Upf3aQ3ULJ3 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC13.59□□□□□ -0.23
Upf3aQ3ULJ3 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Upf3aQ3ULJ3 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Upf3aQ3ULJ3 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Upf3aQ3ULJ3 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Upf3aQ3ULJ3 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Upf3aQ3ULJ3 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Upf3aQ3ULJ3 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Upf3aQ3ULJ3 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Upf3aQ3ULJ3 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Upf3aQ3ULJ3 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Upf3aQ3ULJ3 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.23
Upf3aQ3ULJ3 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC13.58□□□□□ -0.23
Upf3aQ3ULJ3 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Upf3aQ3ULJ3 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Upf3aQ3ULJ3 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Upf3aQ3ULJ3 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
Upf3aQ3ULJ3 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Upf3aQ3ULJ3 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC13.58□□□□□ -0.23
Upf3aQ3ULJ3 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Upf3aQ3ULJ3 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.58□□□□□ -0.24
Upf3aQ3ULJ3 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Upf3aQ3ULJ3 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Upf3aQ3ULJ3 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Upf3aQ3ULJ3 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Upf3aQ3ULJ3 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.58□□□□□ -0.24
Upf3aQ3ULJ3 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Upf3aQ3ULJ3 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Upf3aQ3ULJ3 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Upf3aQ3ULJ3 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC13.58□□□□□ -0.24
Upf3aQ3ULJ3 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms