Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Brf2Q3UAW9 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Brf2Q3UAW9 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Brf2Q3UAW9 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Brf2Q3UAW9 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Brf2Q3UAW9 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Brf2Q3UAW9 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Brf2Q3UAW9 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Brf2Q3UAW9 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.21□□□□□ -0.46
Brf2Q3UAW9 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Brf2Q3UAW9 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Brf2Q3UAW9 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Brf2Q3UAW9 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Brf2Q3UAW9 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Brf2Q3UAW9 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Brf2Q3UAW9 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Brf2Q3UAW9 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Brf2Q3UAW9 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Brf2Q3UAW9 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Brf2Q3UAW9 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.2□□□□□ -0.46
Brf2Q3UAW9 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Brf2Q3UAW9 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Brf2Q3UAW9 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Brf2Q3UAW9 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Brf2Q3UAW9 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
Brf2Q3UAW9 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Brf2Q3UAW9 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.2□□□□□ -0.46
Brf2Q3UAW9 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Brf2Q3UAW9 Gm13612-201ENSMUST00000119276 390 ntBASIC12.2□□□□□ -0.46
Brf2Q3UAW9 Gm14928-201ENSMUST00000120198 477 ntBASIC12.2□□□□□ -0.46
Brf2Q3UAW9 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Brf2Q3UAW9 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Brf2Q3UAW9 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.2□□□□□ -0.46
Brf2Q3UAW9 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Brf2Q3UAW9 Ighv5-13-201ENSMUST00000193550 290 ntBASIC12.2□□□□□ -0.46
Brf2Q3UAW9 Gm6745-201ENSMUST00000199216 526 ntBASIC12.2□□□□□ -0.46
Brf2Q3UAW9 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Brf2Q3UAW9 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Brf2Q3UAW9 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.2□□□□□ -0.46
Brf2Q3UAW9 AC154239.3-201ENSMUST00000226933 674 ntBASIC12.2□□□□□ -0.46
Brf2Q3UAW9 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Brf2Q3UAW9 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Brf2Q3UAW9 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Brf2Q3UAW9 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Brf2Q3UAW9 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Brf2Q3UAW9 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Brf2Q3UAW9 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Brf2Q3UAW9 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Brf2Q3UAW9 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Brf2Q3UAW9 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Brf2Q3UAW9 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Brf2Q3UAW9 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Brf2Q3UAW9 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.2□□□□□ -0.46
Brf2Q3UAW9 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Brf2Q3UAW9 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Brf2Q3UAW9 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Brf2Q3UAW9 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Brf2Q3UAW9 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Brf2Q3UAW9 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Brf2Q3UAW9 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Brf2Q3UAW9 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Brf2Q3UAW9 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.2□□□□□ -0.46
Brf2Q3UAW9 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Brf2Q3UAW9 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Brf2Q3UAW9 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Brf2Q3UAW9 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Brf2Q3UAW9 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Brf2Q3UAW9 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Brf2Q3UAW9 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Brf2Q3UAW9 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Brf2Q3UAW9 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Brf2Q3UAW9 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Brf2Q3UAW9 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Brf2Q3UAW9 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Brf2Q3UAW9 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Brf2Q3UAW9 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Brf2Q3UAW9 Gm11618-201ENSMUST00000117946 267 ntBASIC12.19□□□□□ -0.46
Brf2Q3UAW9 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.19□□□□□ -0.46
Brf2Q3UAW9 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Brf2Q3UAW9 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Brf2Q3UAW9 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Brf2Q3UAW9 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.19□□□□□ -0.46
Brf2Q3UAW9 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC12.19□□□□□ -0.46
Brf2Q3UAW9 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC12.19□□□□□ -0.46
Brf2Q3UAW9 Gm9908-201ENSMUST00000211534 448 ntBASIC12.19□□□□□ -0.46
Brf2Q3UAW9 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Brf2Q3UAW9 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.19□□□□□ -0.46
Brf2Q3UAW9 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Brf2Q3UAW9 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Brf2Q3UAW9 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Brf2Q3UAW9 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Brf2Q3UAW9 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Brf2Q3UAW9 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Brf2Q3UAW9 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Brf2Q3UAW9 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Brf2Q3UAW9 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Brf2Q3UAW9 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Brf2Q3UAW9 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Brf2Q3UAW9 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Brf2Q3UAW9 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms