Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Sox9Q04887 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox9Q04887 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC13.36□□□□□ -0.27
Sox9Q04887 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Sox9Q04887 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox9Q04887 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Sox9Q04887 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC13.36□□□□□ -0.27
Sox9Q04887 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC13.36□□□□□ -0.27
Sox9Q04887 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC13.36□□□□□ -0.27
Sox9Q04887 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC13.36□□□□□ -0.27
Sox9Q04887 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox9Q04887 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.36□□□□□ -0.27
Sox9Q04887 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Sox9Q04887 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox9Q04887 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox9Q04887 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Sox9Q04887 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox9Q04887 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Sox9Q04887 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Sox9Q04887 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Sox9Q04887 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
Sox9Q04887 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox9Q04887 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox9Q04887 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.35□□□□□ -0.27
Sox9Q04887 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sox9Q04887 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox9Q04887 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.35□□□□□ -0.27
Sox9Q04887 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox9Q04887 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox9Q04887 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox9Q04887 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox9Q04887 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Sox9Q04887 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sox9Q04887 Gm11450-201ENSMUST00000121144 333 ntBASIC13.35□□□□□ -0.27
Sox9Q04887 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC13.35□□□□□ -0.27
Sox9Q04887 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC13.35□□□□□ -0.27
Sox9Q04887 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC13.35□□□□□ -0.27
Sox9Q04887 Gm10051-201ENSMUST00000145209 414 ntBASIC13.35□□□□□ -0.27
Sox9Q04887 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox9Q04887 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC13.35□□□□□ -0.27
Sox9Q04887 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC13.35□□□□□ -0.27
Sox9Q04887 Gm32999-201ENSMUST00000192693 562 ntBASIC13.35□□□□□ -0.27
Sox9Q04887 Gm37666-201ENSMUST00000194110 866 ntBASIC13.35□□□□□ -0.27
Sox9Q04887 Gm4607-201ENSMUST00000206649 577 ntBASIC13.35□□□□□ -0.27
Sox9Q04887 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sox9Q04887 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sox9Q04887 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox9Q04887 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox9Q04887 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox9Q04887 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Sox9Q04887 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox9Q04887 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox9Q04887 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.35□□□□□ -0.27
Sox9Q04887 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox9Q04887 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox9Q04887 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox9Q04887 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sox9Q04887 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox9Q04887 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox9Q04887 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox9Q04887 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox9Q04887 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sox9Q04887 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox9Q04887 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Sox9Q04887 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox9Q04887 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.34□□□□□ -0.27
Sox9Q04887 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.34□□□□□ -0.27
Sox9Q04887 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox9Q04887 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox9Q04887 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sox9Q04887 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox9Q04887 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox9Q04887 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC13.34□□□□□ -0.27
Sox9Q04887 Gm14460-201ENSMUST00000121511 639 ntBASIC13.34□□□□□ -0.27
Sox9Q04887 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC13.34□□□□□ -0.27
Sox9Q04887 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC13.34□□□□□ -0.27
Sox9Q04887 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Sox9Q04887 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox9Q04887 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC13.34□□□□□ -0.27
Sox9Q04887 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
Sox9Q04887 AC166992.1-201ENSMUST00000216356 565 ntBASIC13.34□□□□□ -0.27
Sox9Q04887 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sox9Q04887 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC13.34□□□□□ -0.27
Sox9Q04887 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC13.34□□□□□ -0.27
Sox9Q04887 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox9Q04887 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox9Q04887 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC13.34□□□□□ -0.27
Sox9Q04887 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.34□□□□□ -0.27
Sox9Q04887 Gm2673-201ENSMUST00000120958 1608 ntBASIC13.34□□□□□ -0.27
Sox9Q04887 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox9Q04887 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox9Q04887 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox9Q04887 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox9Q04887 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sox9Q04887 Gm3287-205ENSMUST00000228893 1332 ntBASIC13.34□□□□□ -0.27
Sox9Q04887 Gm37827-201ENSMUST00000194486 1542 ntBASIC13.34□□□□□ -0.27
Sox9Q04887 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Sox9Q04887 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Sox9Q04887 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.27
Sox9Q04887 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms