Protein–RNA interactions for Protein: Q04742

Emx1, Homeobox protein EMX1, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Emx1Q04742 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Emx1Q04742 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Emx1Q04742 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Emx1Q04742 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Emx1Q04742 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Emx1Q04742 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Emx1Q04742 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.1□□□□□ -0.47
Emx1Q04742 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Emx1Q04742 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Emx1Q04742 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Emx1Q04742 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Emx1Q04742 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Emx1Q04742 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Emx1Q04742 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Emx1Q04742 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Emx1Q04742 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Emx1Q04742 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.1□□□□□ -0.47
Emx1Q04742 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Emx1Q04742 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Emx1Q04742 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Emx1Q04742 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Emx1Q04742 Gm45667-201ENSMUST00000210380 1316 ntBASIC12.1□□□□□ -0.47
Emx1Q04742 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Emx1Q04742 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Emx1Q04742 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Emx1Q04742 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Emx1Q04742 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Emx1Q04742 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Emx1Q04742 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Emx1Q04742 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Emx1Q04742 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.09□□□□□ -0.47
Emx1Q04742 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Emx1Q04742 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Emx1Q04742 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Emx1Q04742 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Emx1Q04742 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Emx1Q04742 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Emx1Q04742 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.09□□□□□ -0.47
Emx1Q04742 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Emx1Q04742 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Emx1Q04742 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Emx1Q04742 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Emx1Q04742 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Emx1Q04742 Gm8602-201ENSMUST00000184045 607 ntBASIC12.09□□□□□ -0.47
Emx1Q04742 Gm45059-201ENSMUST00000205558 1077 ntBASIC12.09□□□□□ -0.47
Emx1Q04742 Gm18062-201ENSMUST00000208020 547 ntBASIC12.09□□□□□ -0.47
Emx1Q04742 Gm18055-201ENSMUST00000208254 547 ntBASIC12.09□□□□□ -0.47
Emx1Q04742 AC154846.1-201ENSMUST00000226278 862 ntBASIC12.09□□□□□ -0.47
Emx1Q04742 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Emx1Q04742 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Emx1Q04742 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Emx1Q04742 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Emx1Q04742 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Emx1Q04742 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Emx1Q04742 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.09□□□□□ -0.47
Emx1Q04742 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Emx1Q04742 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Emx1Q04742 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Emx1Q04742 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Emx1Q04742 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC12.09□□□□□ -0.47
Emx1Q04742 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Emx1Q04742 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Emx1Q04742 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Emx1Q04742 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Emx1Q04742 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Emx1Q04742 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.09□□□□□ -0.47
Emx1Q04742 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Emx1Q04742 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Emx1Q04742 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Emx1Q04742 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Emx1Q04742 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Emx1Q04742 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Emx1Q04742 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Emx1Q04742 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Emx1Q04742 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Emx1Q04742 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Emx1Q04742 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Emx1Q04742 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Emx1Q04742 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Emx1Q04742 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Emx1Q04742 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.08□□□□□ -0.48
Emx1Q04742 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Emx1Q04742 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Emx1Q04742 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.08□□□□□ -0.48
Emx1Q04742 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Emx1Q04742 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Emx1Q04742 Gm15460-201ENSMUST00000118147 391 ntBASIC12.08□□□□□ -0.48
Emx1Q04742 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12.08□□□□□ -0.48
Emx1Q04742 Gm15806-201ENSMUST00000120696 955 ntBASIC12.08□□□□□ -0.48
Emx1Q04742 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Emx1Q04742 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC12.08□□□□□ -0.48
Emx1Q04742 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC12.08□□□□□ -0.48
Emx1Q04742 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Emx1Q04742 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC12.08□□□□□ -0.48
Emx1Q04742 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Emx1Q04742 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Emx1Q04742 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Emx1Q04742 Gm3695-201ENSMUST00000087222 1009 ntBASIC12.08□□□□□ -0.48
Emx1Q04742 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Emx1Q04742 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms