Protein–RNA interactions for Protein: Q04683

Cxcr5, C-X-C chemokine receptor type 5, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcr5Q04683 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cxcr5Q04683 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cxcr5Q04683 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cxcr5Q04683 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cxcr5Q04683 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cxcr5Q04683 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.31□□□□□ -0.44
Cxcr5Q04683 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.31□□□□□ -0.44
Cxcr5Q04683 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cxcr5Q04683 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cxcr5Q04683 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cxcr5Q04683 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cxcr5Q04683 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cxcr5Q04683 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cxcr5Q04683 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cxcr5Q04683 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cxcr5Q04683 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.31□□□□□ -0.44
Cxcr5Q04683 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cxcr5Q04683 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cxcr5Q04683 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cxcr5Q04683 Gm13689-201ENSMUST00000119360 685 ntBASIC12.31□□□□□ -0.44
Cxcr5Q04683 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cxcr5Q04683 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.31□□□□□ -0.44
Cxcr5Q04683 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cxcr5Q04683 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cxcr5Q04683 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cxcr5Q04683 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cxcr5Q04683 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cxcr5Q04683 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cxcr5Q04683 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cxcr5Q04683 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cxcr5Q04683 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cxcr5Q04683 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cxcr5Q04683 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cxcr5Q04683 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cxcr5Q04683 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cxcr5Q04683 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.31□□□□□ -0.44
Cxcr5Q04683 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cxcr5Q04683 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cxcr5Q04683 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cxcr5Q04683 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cxcr5Q04683 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cxcr5Q04683 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Cxcr5Q04683 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cxcr5Q04683 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cxcr5Q04683 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cxcr5Q04683 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Cxcr5Q04683 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cxcr5Q04683 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Cxcr5Q04683 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cxcr5Q04683 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Cxcr5Q04683 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Cxcr5Q04683 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cxcr5Q04683 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cxcr5Q04683 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cxcr5Q04683 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cxcr5Q04683 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cxcr5Q04683 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Cxcr5Q04683 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.3□□□□□ -0.44
Cxcr5Q04683 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cxcr5Q04683 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cxcr5Q04683 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cxcr5Q04683 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cxcr5Q04683 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Cxcr5Q04683 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cxcr5Q04683 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Cxcr5Q04683 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Cxcr5Q04683 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC12.3□□□□□ -0.44
Cxcr5Q04683 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC12.3□□□□□ -0.44
Cxcr5Q04683 Gm7730-201ENSMUST00000212486 454 ntBASIC12.3□□□□□ -0.44
Cxcr5Q04683 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.3□□□□□ -0.44
Cxcr5Q04683 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cxcr5Q04683 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Cxcr5Q04683 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cxcr5Q04683 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cxcr5Q04683 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cxcr5Q04683 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cxcr5Q04683 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cxcr5Q04683 Syt7-204ENSMUST00000223586 1344 ntBASIC12.3□□□□□ -0.44
Cxcr5Q04683 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cxcr5Q04683 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cxcr5Q04683 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cxcr5Q04683 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cxcr5Q04683 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cxcr5Q04683 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cxcr5Q04683 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.3□□□□□ -0.44
Cxcr5Q04683 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cxcr5Q04683 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cxcr5Q04683 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cxcr5Q04683 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cxcr5Q04683 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cxcr5Q04683 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cxcr5Q04683 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.29□□□□□ -0.44
Cxcr5Q04683 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cxcr5Q04683 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.29□□□□□ -0.44
Cxcr5Q04683 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.29□□□□□ -0.44
Cxcr5Q04683 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cxcr5Q04683 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cxcr5Q04683 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cxcr5Q04683 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cxcr5Q04683 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms