Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Scn1bP97952 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.52
Scn1bP97952 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scn1bP97952 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scn1bP97952 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Scn1bP97952 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC11.83□□□□□ -0.52
Scn1bP97952 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scn1bP97952 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scn1bP97952 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scn1bP97952 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scn1bP97952 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scn1bP97952 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scn1bP97952 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scn1bP97952 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Scn1bP97952 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC11.83□□□□□ -0.52
Scn1bP97952 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Scn1bP97952 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Scn1bP97952 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scn1bP97952 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC11.83□□□□□ -0.52
Scn1bP97952 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Scn1bP97952 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.83□□□□□ -0.52
Scn1bP97952 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Scn1bP97952 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scn1bP97952 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scn1bP97952 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scn1bP97952 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Scn1bP97952 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scn1bP97952 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scn1bP97952 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Scn1bP97952 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scn1bP97952 Gm44086-201ENSMUST00000203251 2349 ntBASIC11.83□□□□□ -0.52
Scn1bP97952 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scn1bP97952 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scn1bP97952 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Scn1bP97952 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Scn1bP97952 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Scn1bP97952 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Scn1bP97952 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scn1bP97952 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Scn1bP97952 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Scn1bP97952 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Scn1bP97952 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Scn1bP97952 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Scn1bP97952 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Scn1bP97952 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Scn1bP97952 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Scn1bP97952 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.82□□□□□ -0.52
Scn1bP97952 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Scn1bP97952 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Scn1bP97952 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Scn1bP97952 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Scn1bP97952 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Scn1bP97952 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Scn1bP97952 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Scn1bP97952 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Scn1bP97952 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Scn1bP97952 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC11.82□□□□□ -0.52
Scn1bP97952 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Scn1bP97952 Gm13015-201ENSMUST00000118674 204 ntBASIC11.82□□□□□ -0.52
Scn1bP97952 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC11.82□□□□□ -0.52
Scn1bP97952 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Scn1bP97952 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC11.82□□□□□ -0.52
Scn1bP97952 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC11.82□□□□□ -0.52
Scn1bP97952 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC11.82□□□□□ -0.52
Scn1bP97952 Gm24158-201ENSMUST00000175263 71 ntBASIC11.82□□□□□ -0.52
Scn1bP97952 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC11.82□□□□□ -0.52
Scn1bP97952 Gm27631-201ENSMUST00000184163 466 ntBASIC11.82□□□□□ -0.52
Scn1bP97952 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC11.82□□□□□ -0.52
Scn1bP97952 Gm44124-201ENSMUST00000204159 472 ntBASIC11.82□□□□□ -0.52
Scn1bP97952 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Scn1bP97952 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Scn1bP97952 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Scn1bP97952 Gm3695-201ENSMUST00000087222 1009 ntBASIC11.82□□□□□ -0.52
Scn1bP97952 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.82□□□□□ -0.52
Scn1bP97952 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Scn1bP97952 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Scn1bP97952 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Scn1bP97952 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Scn1bP97952 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Scn1bP97952 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Scn1bP97952 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Scn1bP97952 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Scn1bP97952 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC11.82□□□□□ -0.52
Scn1bP97952 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Scn1bP97952 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
Scn1bP97952 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Scn1bP97952 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Scn1bP97952 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Scn1bP97952 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Scn1bP97952 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Scn1bP97952 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Scn1bP97952 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Scn1bP97952 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Scn1bP97952 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Scn1bP97952 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Scn1bP97952 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Scn1bP97952 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Scn1bP97952 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Scn1bP97952 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Scn1bP97952 Gm5466-201ENSMUST00000119395 1890 ntBASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms