Protein–RNA interactions for Protein: P97785

Gfra1, GDNF family receptor alpha-1, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra1P97785 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Gfra1P97785 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Gfra1P97785 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Gfra1P97785 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Gfra1P97785 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Gfra1P97785 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Gfra1P97785 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Gfra1P97785 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Gfra1P97785 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Gfra1P97785 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Gfra1P97785 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Gfra1P97785 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC10.72□□□□□ -0.69
Gfra1P97785 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Gfra1P97785 Gm25927-201ENSMUST00000175058 117 ntBASIC10.72□□□□□ -0.69
Gfra1P97785 Gm37008-201ENSMUST00000195712 319 ntBASIC10.72□□□□□ -0.69
Gfra1P97785 Gm19931-201ENSMUST00000198920 368 ntBASIC10.72□□□□□ -0.69
Gfra1P97785 Gm44974-201ENSMUST00000206387 1279 ntBASIC10.72□□□□□ -0.69
Gfra1P97785 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Gfra1P97785 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Gfra1P97785 Gm4935-201ENSMUST00000221316 1198 ntBASIC10.72□□□□□ -0.69
Gfra1P97785 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Gfra1P97785 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Gfra1P97785 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Gfra1P97785 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC10.72□□□□□ -0.69
Gfra1P97785 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Gfra1P97785 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Gfra1P97785 Gm15897-201ENSMUST00000117770 1486 ntBASIC10.72□□□□□ -0.69
Gfra1P97785 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Gfra1P97785 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Gfra1P97785 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Gfra1P97785 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Gfra1P97785 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC10.72□□□□□ -0.69
Gfra1P97785 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Gfra1P97785 Gm42928-201ENSMUST00000197338 3339 ntBASIC10.72□□□□□ -0.69
Gfra1P97785 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Gfra1P97785 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Gfra1P97785 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Gfra1P97785 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Gfra1P97785 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC10.72□□□□□ -0.69
Gfra1P97785 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Gfra1P97785 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Gfra1P97785 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Gfra1P97785 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Gfra1P97785 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Gfra1P97785 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Gfra1P97785 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Gfra1P97785 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Gfra1P97785 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Gfra1P97785 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Gfra1P97785 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC10.71□□□□□ -0.69
Gfra1P97785 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Gfra1P97785 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Gfra1P97785 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
Gfra1P97785 Gm14608-201ENSMUST00000120030 1553 ntBASIC10.71□□□□□ -0.69
Gfra1P97785 Gm11978-201ENSMUST00000122315 466 ntBASIC10.71□□□□□ -0.69
Gfra1P97785 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Gfra1P97785 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Gfra1P97785 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Gfra1P97785 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Gfra1P97785 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Gfra1P97785 Gm7029-201ENSMUST00000173226 450 ntBASIC10.71□□□□□ -0.69
Gfra1P97785 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Gfra1P97785 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Gfra1P97785 Gm38297-201ENSMUST00000195122 1057 ntBASIC10.71□□□□□ -0.69
Gfra1P97785 Gm42627-201ENSMUST00000197347 224 ntBASIC10.71□□□□□ -0.69
Gfra1P97785 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Gfra1P97785 Gm45880-201ENSMUST00000213041 853 ntBASIC10.71□□□□□ -0.69
Gfra1P97785 Gm19163-201ENSMUST00000223313 780 ntBASIC10.71□□□□□ -0.69
Gfra1P97785 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Gfra1P97785 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Gfra1P97785 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Gfra1P97785 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Gfra1P97785 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Gfra1P97785 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Gfra1P97785 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Gfra1P97785 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Gfra1P97785 Snora73a-201ENSMUST00000082453 205 ntBASIC10.71□□□□□ -0.69
Gfra1P97785 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Gfra1P97785 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Gfra1P97785 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
Gfra1P97785 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.7
Gfra1P97785 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Gfra1P97785 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Gfra1P97785 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC10.71□□□□□ -0.7
Gfra1P97785 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.7
Gfra1P97785 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Gfra1P97785 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Gfra1P97785 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Gfra1P97785 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Gfra1P97785 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Gfra1P97785 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Gfra1P97785 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Gfra1P97785 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Gfra1P97785 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Gfra1P97785 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Gfra1P97785 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Gfra1P97785 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Gfra1P97785 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Gfra1P97785 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC10.7□□□□□ -0.7
Gfra1P97785 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms