Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nkx2-3P97334 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Nkx2-3P97334 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nkx2-3P97334 Gm16481-201ENSMUST00000119074 1227 ntBASIC16.17■□□□□ 0.18
Nkx2-3P97334 Gm28196-201ENSMUST00000187719 640 ntBASIC16.17■□□□□ 0.18
Nkx2-3P97334 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nkx2-3P97334 AC153974.2-201ENSMUST00000218577 1025 ntBASIC16.17■□□□□ 0.18
Nkx2-3P97334 AC166344.1-202ENSMUST00000224139 234 ntBASIC16.17■□□□□ 0.18
Nkx2-3P97334 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nkx2-3P97334 Gm10312-201ENSMUST00000078515 489 ntBASIC16.17■□□□□ 0.18
Nkx2-3P97334 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Nkx2-3P97334 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nkx2-3P97334 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC16.17■□□□□ 0.18
Nkx2-3P97334 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Nkx2-3P97334 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nkx2-3P97334 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
Nkx2-3P97334 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Nkx2-3P97334 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nkx2-3P97334 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Nkx2-3P97334 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC16.17■□□□□ 0.18
Nkx2-3P97334 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC16.17■□□□□ 0.18
Nkx2-3P97334 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nkx2-3P97334 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Nkx2-3P97334 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nkx2-3P97334 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nkx2-3P97334 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nkx2-3P97334 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nkx2-3P97334 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nkx2-3P97334 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nkx2-3P97334 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nkx2-3P97334 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nkx2-3P97334 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nkx2-3P97334 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nkx2-3P97334 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nkx2-3P97334 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Nkx2-3P97334 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nkx2-3P97334 Mir874-201ENSMUST00000104769 76 ntBASIC16.16■□□□□ 0.18
Nkx2-3P97334 Gm15703-201ENSMUST00000120250 880 ntBASIC16.16■□□□□ 0.18
Nkx2-3P97334 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC16.16■□□□□ 0.18
Nkx2-3P97334 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC16.16■□□□□ 0.18
Nkx2-3P97334 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC16.16■□□□□ 0.18
Nkx2-3P97334 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Nkx2-3P97334 Gm27023-201ENSMUST00000182372 285 ntBASIC16.16■□□□□ 0.18
Nkx2-3P97334 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC16.16■□□□□ 0.18
Nkx2-3P97334 Gm21027-201ENSMUST00000219300 1236 ntBASIC16.16■□□□□ 0.18
Nkx2-3P97334 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nkx2-3P97334 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nkx2-3P97334 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC16.16■□□□□ 0.18
Nkx2-3P97334 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nkx2-3P97334 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nkx2-3P97334 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nkx2-3P97334 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Nkx2-3P97334 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nkx2-3P97334 AC137842.1-201ENSMUST00000227896 2064 ntBASIC16.15■□□□□ 0.18
Nkx2-3P97334 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nkx2-3P97334 Ptprs-211ENSMUST00000223859 5588 ntBASIC16.15■□□□□ 0.18
Nkx2-3P97334 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC16.15■□□□□ 0.18
Nkx2-3P97334 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nkx2-3P97334 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nkx2-3P97334 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Nkx2-3P97334 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC16.15■□□□□ 0.18
Nkx2-3P97334 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC16.15■□□□□ 0.18
Nkx2-3P97334 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nkx2-3P97334 Gm12314-201ENSMUST00000118104 538 ntBASIC16.15■□□□□ 0.18
Nkx2-3P97334 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Nkx2-3P97334 Gm22902-201ENSMUST00000158488 302 ntBASIC16.15■□□□□ 0.18
Nkx2-3P97334 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC16.15■□□□□ 0.18
Nkx2-3P97334 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nkx2-3P97334 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Nkx2-3P97334 Gm8494-201ENSMUST00000178171 1233 ntBASIC16.15■□□□□ 0.18
Nkx2-3P97334 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nkx2-3P97334 Gm34767-201ENSMUST00000191813 1062 ntBASIC16.15■□□□□ 0.18
Nkx2-3P97334 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC16.15■□□□□ 0.18
Nkx2-3P97334 Rprl1-202ENSMUST00000198476 238 ntBASIC16.15■□□□□ 0.18
Nkx2-3P97334 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nkx2-3P97334 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Nkx2-3P97334 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nkx2-3P97334 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nkx2-3P97334 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nkx2-3P97334 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Nkx2-3P97334 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC16.15■□□□□ 0.18
Nkx2-3P97334 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Nkx2-3P97334 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nkx2-3P97334 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Nkx2-3P97334 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC16.15■□□□□ 0.18
Nkx2-3P97334 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC16.15■□□□□ 0.18
Nkx2-3P97334 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nkx2-3P97334 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Nkx2-3P97334 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nkx2-3P97334 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nkx2-3P97334 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
Nkx2-3P97334 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Nkx2-3P97334 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Nkx2-3P97334 Gm14644-201ENSMUST00000116671 647 ntBASIC16.14■□□□□ 0.17
Nkx2-3P97334 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC16.14■□□□□ 0.17
Nkx2-3P97334 Gm5863-201ENSMUST00000121760 1008 ntBASIC16.14■□□□□ 0.17
Nkx2-3P97334 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC16.14■□□□□ 0.17
Nkx2-3P97334 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Nkx2-3P97334 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nkx2-3P97334 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 70.8 ms