Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tpm1P58771 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tpm1P58771 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tpm1P58771 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tpm1P58771 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tpm1P58771 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC14.45□□□□□ -0.1
Tpm1P58771 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Tpm1P58771 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tpm1P58771 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Tpm1P58771 Gm43703-201ENSMUST00000200523 763 ntBASIC14.45□□□□□ -0.1
Tpm1P58771 Gm17795-201ENSMUST00000214505 757 ntBASIC14.45□□□□□ -0.1
Tpm1P58771 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tpm1P58771 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tpm1P58771 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tpm1P58771 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tpm1P58771 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tpm1P58771 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tpm1P58771 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tpm1P58771 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC14.44□□□□□ -0.1
Tpm1P58771 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC14.44□□□□□ -0.1
Tpm1P58771 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tpm1P58771 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tpm1P58771 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tpm1P58771 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Tpm1P58771 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tpm1P58771 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Tpm1P58771 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tpm1P58771 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
Tpm1P58771 Gm12537-201ENSMUST00000119266 1002 ntBASIC14.44□□□□□ -0.1
Tpm1P58771 Gm12070-201ENSMUST00000119551 1002 ntBASIC14.44□□□□□ -0.1
Tpm1P58771 Gm12671-201ENSMUST00000119978 1002 ntBASIC14.44□□□□□ -0.1
Tpm1P58771 Gm13292-201ENSMUST00000120014 1000 ntBASIC14.44□□□□□ -0.1
Tpm1P58771 Gm12403-201ENSMUST00000121384 959 ntBASIC14.44□□□□□ -0.1
Tpm1P58771 Gm6161-201ENSMUST00000121942 1102 ntBASIC14.44□□□□□ -0.1
Tpm1P58771 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Tpm1P58771 Gm6254-201ENSMUST00000168178 1072 ntBASIC14.44□□□□□ -0.1
Tpm1P58771 Gm6153-201ENSMUST00000172004 1058 ntBASIC14.44□□□□□ -0.1
Tpm1P58771 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Tpm1P58771 Gm10359-201ENSMUST00000180167 1002 ntBASIC14.44□□□□□ -0.1
Tpm1P58771 Gm12033-201ENSMUST00000180654 1002 ntBASIC14.44□□□□□ -0.1
Tpm1P58771 Gm5559-201ENSMUST00000180755 1002 ntBASIC14.44□□□□□ -0.1
Tpm1P58771 Gm4335-201ENSMUST00000182581 1004 ntBASIC14.44□□□□□ -0.1
Tpm1P58771 Gm38144-201ENSMUST00000192790 465 ntBASIC14.44□□□□□ -0.1
Tpm1P58771 Gm2213-201ENSMUST00000197485 688 ntBASIC14.44□□□□□ -0.1
Tpm1P58771 Gm5641-202ENSMUST00000198699 1080 ntBASIC14.44□□□□□ -0.1
Tpm1P58771 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Tpm1P58771 CT573086.1-201ENSMUST00000227202 1074 ntBASIC14.44□□□□□ -0.1
Tpm1P58771 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tpm1P58771 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tpm1P58771 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tpm1P58771 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC14.44□□□□□ -0.1
Tpm1P58771 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Tpm1P58771 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tpm1P58771 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tpm1P58771 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Tpm1P58771 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tpm1P58771 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Tpm1P58771 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC14.44□□□□□ -0.1
Tpm1P58771 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC14.44□□□□□ -0.1
Tpm1P58771 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tpm1P58771 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Tpm1P58771 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tpm1P58771 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC14.44□□□□□ -0.1
Tpm1P58771 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
Tpm1P58771 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Tpm1P58771 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tpm1P58771 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tpm1P58771 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tpm1P58771 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tpm1P58771 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tpm1P58771 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC14.43□□□□□ -0.1
Tpm1P58771 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Tpm1P58771 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tpm1P58771 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC14.43□□□□□ -0.1
Tpm1P58771 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tpm1P58771 Gm27680-201ENSMUST00000184192 160 ntBASIC14.43□□□□□ -0.1
Tpm1P58771 Gm17870-201ENSMUST00000219489 1174 ntBASIC14.43□□□□□ -0.1
Tpm1P58771 Chchd1-203ENSMUST00000224633 557 ntBASIC14.43□□□□□ -0.1
Tpm1P58771 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tpm1P58771 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tpm1P58771 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tpm1P58771 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tpm1P58771 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tpm1P58771 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tpm1P58771 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tpm1P58771 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tpm1P58771 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Tpm1P58771 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Tpm1P58771 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC14.43□□□□□ -0.1
Tpm1P58771 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tpm1P58771 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tpm1P58771 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Tpm1P58771 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Tpm1P58771 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Tpm1P58771 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Tpm1P58771 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Tpm1P58771 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tpm1P58771 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tpm1P58771 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tpm1P58771 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms