Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.96□□□□□ -0.33
Fdft1P53798 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Fdft1P53798 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Fdft1P53798 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Fdft1P53798 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Fdft1P53798 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.33
Fdft1P53798 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Fdft1P53798 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Fdft1P53798 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Fdft1P53798 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Fdft1P53798 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Fdft1P53798 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.96□□□□□ -0.33
Fdft1P53798 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Fdft1P53798 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Fdft1P53798 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Fdft1P53798 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.96□□□□□ -0.34
Fdft1P53798 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Fdft1P53798 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Fdft1P53798 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.96□□□□□ -0.34
Fdft1P53798 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Fdft1P53798 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Fdft1P53798 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
Fdft1P53798 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Fdft1P53798 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Fdft1P53798 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Fdft1P53798 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Fdft1P53798 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Fdft1P53798 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Fdft1P53798 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Fdft1P53798 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Fdft1P53798 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Fdft1P53798 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.95□□□□□ -0.34
Fdft1P53798 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Fdft1P53798 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Fdft1P53798 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Fdft1P53798 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Fdft1P53798 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.95□□□□□ -0.34
Fdft1P53798 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Fdft1P53798 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.95□□□□□ -0.34
Fdft1P53798 Gm18018-201ENSMUST00000198273 408 ntBASIC12.95□□□□□ -0.34
Fdft1P53798 Gtpbp10-211ENSMUST00000198799 648 ntBASIC12.95□□□□□ -0.34
Fdft1P53798 Gm19931-201ENSMUST00000198920 368 ntBASIC12.95□□□□□ -0.34
Fdft1P53798 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC12.95□□□□□ -0.34
Fdft1P53798 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
Fdft1P53798 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Fdft1P53798 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Fdft1P53798 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.95□□□□□ -0.34
Fdft1P53798 Itm2b-204ENSMUST00000228637 783 ntBASIC12.95□□□□□ -0.34
Fdft1P53798 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Fdft1P53798 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Fdft1P53798 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Fdft1P53798 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Fdft1P53798 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Fdft1P53798 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Fdft1P53798 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Fdft1P53798 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Fdft1P53798 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Fdft1P53798 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Fdft1P53798 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Fdft1P53798 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Fdft1P53798 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Fdft1P53798 Abhd6-203ENSMUST00000225234 1958 ntBASIC12.94□□□□□ -0.34
Fdft1P53798 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Fdft1P53798 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Fdft1P53798 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC12.94□□□□□ -0.34
Fdft1P53798 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.94□□□□□ -0.34
Fdft1P53798 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Fdft1P53798 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Fdft1P53798 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Fdft1P53798 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Fdft1P53798 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.94□□□□□ -0.34
Fdft1P53798 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Fdft1P53798 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.94□□□□□ -0.34
Fdft1P53798 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Fdft1P53798 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Fdft1P53798 Gm12091-201ENSMUST00000146791 830 ntBASIC12.94□□□□□ -0.34
Fdft1P53798 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Fdft1P53798 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Fdft1P53798 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC12.94□□□□□ -0.34
Fdft1P53798 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Fdft1P53798 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Fdft1P53798 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.94□□□□□ -0.34
Fdft1P53798 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Fdft1P53798 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Fdft1P53798 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Fdft1P53798 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Fdft1P53798 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Fdft1P53798 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.94□□□□□ -0.34
Fdft1P53798 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Fdft1P53798 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Fdft1P53798 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Fdft1P53798 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Fdft1P53798 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.94□□□□□ -0.34
Fdft1P53798 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.94□□□□□ -0.34
Fdft1P53798 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Fdft1P53798 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Fdft1P53798 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Fdft1P53798 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Fdft1P53798 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Fdft1P53798 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms