Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Cux1P53564 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cux1P53564 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cux1P53564 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC19.58■□□□□ 0.73
Cux1P53564 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Cux1P53564 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Cux1P53564 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC19.58■□□□□ 0.73
Cux1P53564 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Cux1P53564 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC19.58■□□□□ 0.72
Cux1P53564 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cux1P53564 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cux1P53564 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC19.58■□□□□ 0.72
Cux1P53564 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Cux1P53564 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.72
Cux1P53564 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cux1P53564 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cux1P53564 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cux1P53564 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC19.58■□□□□ 0.72
Cux1P53564 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Cux1P53564 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cux1P53564 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC19.57■□□□□ 0.72
Cux1P53564 Gm13611-201ENSMUST00000118269 318 ntBASIC19.57■□□□□ 0.72
Cux1P53564 Gm8566-201ENSMUST00000120174 465 ntBASIC19.57■□□□□ 0.72
Cux1P53564 Gm17827-201ENSMUST00000211825 742 ntBASIC19.57■□□□□ 0.72
Cux1P53564 AC166992.1-201ENSMUST00000216356 565 ntBASIC19.57■□□□□ 0.72
Cux1P53564 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC19.57■□□□□ 0.72
Cux1P53564 Gm9826-201ENSMUST00000029124 1299 ntBASIC19.57■□□□□ 0.72
Cux1P53564 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cux1P53564 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cux1P53564 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Cux1P53564 Gm13142-201ENSMUST00000117213 1453 ntBASIC19.57■□□□□ 0.72
Cux1P53564 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Cux1P53564 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cux1P53564 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cux1P53564 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cux1P53564 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cux1P53564 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Cux1P53564 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cux1P53564 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cux1P53564 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cux1P53564 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cux1P53564 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cux1P53564 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Cux1P53564 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cux1P53564 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cux1P53564 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cux1P53564 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC19.57■□□□□ 0.72
Cux1P53564 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cux1P53564 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC19.56■□□□□ 0.72
Cux1P53564 Gm7851-201ENSMUST00000117574 323 ntBASIC19.56■□□□□ 0.72
Cux1P53564 Gm18304-201ENSMUST00000189162 546 ntBASIC19.56■□□□□ 0.72
Cux1P53564 AC159819.2-201ENSMUST00000216151 342 ntBASIC19.56■□□□□ 0.72
Cux1P53564 CT009713.8-201ENSMUST00000225448 560 ntBASIC19.56■□□□□ 0.72
Cux1P53564 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cux1P53564 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cux1P53564 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Cux1P53564 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
Cux1P53564 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cux1P53564 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cux1P53564 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cux1P53564 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cux1P53564 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC19.56■□□□□ 0.72
Cux1P53564 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cux1P53564 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cux1P53564 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Cux1P53564 Ptprs-211ENSMUST00000223859 5588 ntBASIC19.56■□□□□ 0.72
Cux1P53564 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cux1P53564 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC19.56■□□□□ 0.72
Cux1P53564 Gm9062-201ENSMUST00000117712 727 ntBASIC19.56■□□□□ 0.72
Cux1P53564 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Cux1P53564 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cux1P53564 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cux1P53564 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC19.56■□□□□ 0.72
Cux1P53564 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Cux1P53564 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Cux1P53564 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cux1P53564 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cux1P53564 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cux1P53564 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cux1P53564 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cux1P53564 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cux1P53564 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cux1P53564 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Cux1P53564 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC19.55■□□□□ 0.72
Cux1P53564 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cux1P53564 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cux1P53564 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Cux1P53564 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cux1P53564 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Cux1P53564 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Cux1P53564 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Cux1P53564 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Cux1P53564 Gm24231-201ENSMUST00000104315 133 ntBASIC19.55■□□□□ 0.72
Cux1P53564 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Cux1P53564 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Cux1P53564 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC19.55■□□□□ 0.72
Cux1P53564 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Cux1P53564 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Cux1P53564 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC19.55■□□□□ 0.72
Cux1P53564 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC19.55■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms