Protein–RNA interactions for Protein: P50404

Sftpd, Pulmonary surfactant-associated protein D, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpdP50404 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SftpdP50404 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SftpdP50404 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SftpdP50404 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SftpdP50404 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SftpdP50404 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC13.63□□□□□ -0.23
SftpdP50404 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SftpdP50404 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
SftpdP50404 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SftpdP50404 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SftpdP50404 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SftpdP50404 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
SftpdP50404 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC13.62□□□□□ -0.23
SftpdP50404 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SftpdP50404 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SftpdP50404 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.62□□□□□ -0.23
SftpdP50404 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SftpdP50404 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SftpdP50404 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
SftpdP50404 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC13.62□□□□□ -0.23
SftpdP50404 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
SftpdP50404 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SftpdP50404 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SftpdP50404 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC13.62□□□□□ -0.23
SftpdP50404 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
SftpdP50404 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
SftpdP50404 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC13.62□□□□□ -0.23
SftpdP50404 Gm37042-201ENSMUST00000193816 581 ntBASIC13.62□□□□□ -0.23
SftpdP50404 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC13.62□□□□□ -0.23
SftpdP50404 Gm6266-201ENSMUST00000203844 806 ntBASIC13.62□□□□□ -0.23
SftpdP50404 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC13.62□□□□□ -0.23
SftpdP50404 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC13.62□□□□□ -0.23
SftpdP50404 AC166051.1-201ENSMUST00000214313 210 ntBASIC13.62□□□□□ -0.23
SftpdP50404 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SftpdP50404 Cdk7-205ENSMUST00000225990 1159 ntBASIC13.62□□□□□ -0.23
SftpdP50404 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SftpdP50404 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC13.62□□□□□ -0.23
SftpdP50404 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SftpdP50404 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SftpdP50404 n-R5s77-201ENSMUST00000083757 119 ntBASIC13.62□□□□□ -0.23
SftpdP50404 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
SftpdP50404 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
SftpdP50404 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.62□□□□□ -0.23
SftpdP50404 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SftpdP50404 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SftpdP50404 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
SftpdP50404 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SftpdP50404 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SftpdP50404 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC13.62□□□□□ -0.23
SftpdP50404 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SftpdP50404 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
SftpdP50404 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
SftpdP50404 AC114008.2-201ENSMUST00000227699 1347 ntBASIC13.62□□□□□ -0.23
SftpdP50404 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SftpdP50404 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SftpdP50404 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SftpdP50404 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
SftpdP50404 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
SftpdP50404 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.61□□□□□ -0.23
SftpdP50404 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SftpdP50404 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
SftpdP50404 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC13.61□□□□□ -0.23
SftpdP50404 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SftpdP50404 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SftpdP50404 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SftpdP50404 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
SftpdP50404 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC13.61□□□□□ -0.23
SftpdP50404 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SftpdP50404 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SftpdP50404 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SftpdP50404 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SftpdP50404 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SftpdP50404 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
SftpdP50404 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SftpdP50404 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SftpdP50404 Gm16177-201ENSMUST00000120728 718 ntBASIC13.61□□□□□ -0.23
SftpdP50404 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SftpdP50404 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC13.61□□□□□ -0.23
SftpdP50404 Gm17208-201ENSMUST00000168388 535 ntBASIC13.61□□□□□ -0.23
SftpdP50404 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC13.61□□□□□ -0.23
SftpdP50404 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SftpdP50404 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SftpdP50404 Gm18187-201ENSMUST00000196476 984 ntBASIC13.61□□□□□ -0.23
SftpdP50404 Gm9299-201ENSMUST00000206392 1140 ntBASIC13.61□□□□□ -0.23
SftpdP50404 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC13.61□□□□□ -0.23
SftpdP50404 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC13.61□□□□□ -0.23
SftpdP50404 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SftpdP50404 AC122459.1-201ENSMUST00000228373 885 ntBASIC13.61□□□□□ -0.23
SftpdP50404 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
SftpdP50404 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SftpdP50404 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SftpdP50404 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SftpdP50404 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SftpdP50404 CT009713.10-201ENSMUST00000225013 1986 ntBASIC13.61□□□□□ -0.23
SftpdP50404 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
SftpdP50404 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC13.61□□□□□ -0.23
SftpdP50404 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SftpdP50404 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
SftpdP50404 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC13.61□□□□□ -0.23
SftpdP50404 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms